RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 AMOTL2Q9Y2J4 779 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ZNF202O95125 648 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 NEDD9Q14511 834 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 HSP90AA5PQ58FG0 334 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 WAPLQ7Z5K2 1190 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SKAP1Q86WV1 359 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 BBOF1Q8ND07 529 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 DHX58Q96C10 678 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 TBC1D31Q96DN5 1066 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 MPHOSPH10O00566 681 aaKnown RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ST5P78524 1137 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 VSIG1Q86XK7 387 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 UBL4BQ8N7F7 174 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 TBX22Q9Y458 520 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SNX14Q9Y5W7 946 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SPATA31E1Q6ZUB1 1445 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SEC24BO95487 1268 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 DDX54Q8TDD1 881 aaKnown RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ZRANB1Q9UGI0 708 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 KIF14Q15058 1648 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ZNF521Q96K83 1311 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 KDM5BQ9UGL1 1544 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 DMTNQ08495 405 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PAK1Q13153 545 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 ELF2Q15723 593 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PARP10Q53GL7 1025 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 COPS6Q7L5N1 327 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 HYOU1Q9Y4L1 999 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 RIMS2Q9UQ26 1411 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 CIB2O75838 187 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 GBP7Q8N8V2 638 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 XAGE3Q8WTP9 111 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 STX8Q9UNK0 236 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MTMR6Q9Y217 621 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PHACTR2O75167 634 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 AFMP43652 599 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 EIF4A2Q14240 407 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MAP7Q14244 749 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 NBPF9Q3BBW0 867 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.87□□□□□ -1.311e-6■■■■■ 56.2
PRPF4B-205ENST00000480058 ANTXR1Q9H6X2 564 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 RCOR1Q9UKL0 485 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MAP3K5Q99683 1374 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 OAS2P29728 719 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MARCKSP29966 332 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 GTF3C6Q969F1 213 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 METTL14Q9HCE5 456 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PHLPP2Q6ZVD8 1323 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 LAMC3Q9Y6N6 1575 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 NAA25Q14CX7 972 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 RPS6KA1Q15418 735 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 CSGALNACT2Q8N6G5 542 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 CCHCR1Q8TD31 782 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 KIFAP3Q92845 792 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 SPTLC3Q9NUV7 552 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PFKFB2O60825 505 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 RHOXF2BP0C7M4 288 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MPRIPQ6WCQ1 1025 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 SMARCC2Q8TAQ2 1214 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 RHOXF2Q9BQY4 288 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 ANKRD2Q9GZV1 360 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 NT5C3AQ9H0P0 336 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 ZSWIM6Q9HCJ5 1215 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 VCX3AQ9NNX9 186 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 MIS18AQ9NYP9 233 aa6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 BZW2Q9Y6E2 419 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-205ENST00000480058 PLB1Q6P1J6 1458 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 NUTM2BA6NNL0 878 aaPredicted RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 NUTM2EB1AL46 878 aaPredicted RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 RAPGEF3O95398 923 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 PCK1P35558 622 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 FBXO18Q8NFZ0 1043 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 ACTR5Q9H9F9 607 aaPredicted RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 HAND2P61296 217 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SRGAP1Q7Z6B7 1085 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 TXNDC16Q9P2K2 825 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 TLDC2A0PJX2 215 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 CLNS1AP54105 237 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 KRT40Q6A162 431 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 TRPM2O94759 1503 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 UHRF1BP1LA0JNW5 1464 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SLC27A2O14975 620 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 PTCD1O75127 700 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 CYP7A1P22680 504 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 EEF1GP26641 437 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 MAN1A1P33908 653 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 NAPAP54920 295 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 MXRA7P84157 204 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 546.3 ms