RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 FMNL1O95466 1100 aaPredicted RBP16.51■□□□□ 0.23
ABCF1-206ENST00000479542 PTPRAP18433 802 aa16.51■□□□□ 0.23
ABCF1-206ENST00000479542 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
ABCF1-206ENST00000479542 FCGRTP55899 365 aa16.51■□□□□ 0.23
ABCF1-206ENST00000479542 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
ABCF1-206ENST00000479542 SIL1Q9H173 461 aa16.51■□□□□ 0.23
ABCF1-206ENST00000479542 GNAI3P08754 354 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 RGS3P49796 1198 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 UBXN2AP68543 259 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
ABCF1-206ENST00000479542 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
ABCF1-206ENST00000479542 ZHX2Q9Y6X8 837 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
ABCF1-206ENST00000479542 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 IGSF3O75054 1194 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 IRF5Q13568 498 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
ABCF1-206ENST00000479542 MTFR1Q15390 333 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 SH3BP5LQ7L8J4 393 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
ABCF1-206ENST00000479542 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
ABCF1-206ENST00000479542 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
ABCF1-206ENST00000479542 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
ABCF1-206ENST00000479542 MYH2Q9UKX2 1941 aa16.48■□□□□ 0.23
ABCF1-206ENST00000479542 COL2A1P02458 1487 aaPredicted RBP16.48■□□□□ 0.23
ABCF1-206ENST00000479542 LDHCP07864 332 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 CCL5P13501 91 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 RHBDL3P58872 404 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 TIMM10P62072 90 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 PROCA1Q8NCQ7 364 aaPredicted RBP16.47■□□□□ 0.23
ABCF1-206ENST00000479542 HTATIP2Q9BUP3 242 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
ABCF1-206ENST00000479542 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
ABCF1-206ENST00000479542 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 A0A1B0GUL7 405 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
ABCF1-206ENST00000479542 H0YGN5 161 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 CYP2C8P10632 490 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 ADORA1P30542 326 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
ABCF1-206ENST00000479542 GSTO1P78417 241 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 PRKCZQ05513 592 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 XAGE2Q96GT9 111 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 MEIS3Q99687 375 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 RNF208Q9H0X6 261 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
ABCF1-206ENST00000479542 CEP290O15078 2479 aa16.45■□□□□ 0.22
ABCF1-206ENST00000479542 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
ABCF1-206ENST00000479542 SGPL1O95470 568 aa16.45■□□□□ 0.22
ABCF1-206ENST00000479542 BTDP43251 543 aa16.45■□□□□ 0.22
ABCF1-206ENST00000479542 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
ABCF1-206ENST00000479542 DDX4Q9NQI0 724 aaKnown RBP16.45■□□□□ 0.22
ABCF1-206ENST00000479542 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 MECOMQ03112 1051 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
ABCF1-206ENST00000479542 PRO3102Q9H379 93 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 NR2E3Q9Y5X4 410 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 MGAMO43451 1857 aa16.44■□□□□ 0.22
ABCF1-206ENST00000479542 PTPRFP10586 1907 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
ABCF1-206ENST00000479542 ADCY3O60266 1144 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
ABCF1-206ENST00000479542 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
ABCF1-206ENST00000479542 FLT3LGP49771 235 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 TFCP2Q12800 502 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 SH3D19Q5HYK7 790 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 NSUN4Q96CB9 384 aaKnown RBP16.43■□□□□ 0.22
ABCF1-206ENST00000479542 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 GABRQQ9UN88 632 aa16.43■□□□□ 0.22
ABCF1-206ENST00000479542 PHIPQ8WWQ0 1821 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 A0A1W2PPC1 479 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 MYCP01106 439 aaPredicted RBP16.42■□□□□ 0.22
ABCF1-206ENST00000479542 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.223e-10■□□□□ 8.4
ABCF1-206ENST00000479542 GADL1Q6ZQY3 521 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
ABCF1-206ENST00000479542 DPF3Q92784 378 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 PAK6Q9NQU5 681 aaPredicted RBP16.42■□□□□ 0.22
ABCF1-206ENST00000479542 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 BIN2Q9UBW5 565 aaPredicted RBP16.42■□□□□ 0.22
ABCF1-206ENST00000479542 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
ABCF1-206ENST00000479542 DOCK1Q14185 1865 aa16.42■□□□□ 0.22
ABCF1-206ENST00000479542 TNPO2O14787 897 aaKnown RBP16.41■□□□□ 0.22
ABCF1-206ENST00000479542 UQCRFS1P1P0C7P4 283 aa16.41■□□□□ 0.22
ABCF1-206ENST00000479542 CAP2P40123 477 aa16.41■□□□□ 0.22
ABCF1-206ENST00000479542 METTL16Q86W50 562 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms