RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 TANGO6Q9C0B7 1094 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
RFC4-212ENST00000479307 CCDC86Q9H6F5 360 aaKnown RBP7.76□□□□□ -1.17
RFC4-212ENST00000479307 UBP1Q9NZI7 540 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 PRKAG2Q9UGJ0 569 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 FANCD2Q9BXW9 1451 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 DDX3YO15523 660 aaKnown RBP7.75□□□□□ -1.17
RFC4-212ENST00000479307 RASSF7Q02833 373 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 CWF19L2Q2TBE0 894 aaKnown RBP7.75□□□□□ -1.17
RFC4-212ENST00000479307 EXOSC6Q5RKV6 272 aaKnown RBP7.75□□□□□ -1.17
RFC4-212ENST00000479307 NKD1Q969G9 470 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 ARMC5Q96C12 935 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
RFC4-212ENST00000479307 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
RFC4-212ENST00000479307 KCNK4Q9NYG8 393 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 STRIP2Q9ULQ0 834 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 PCDHA4Q9UN74 947 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
RFC4-212ENST00000479307 URB2Q14146 1524 aaKnown RBP7.74□□□□□ -1.17
RFC4-212ENST00000479307 MEGF11A6BM72 1044 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 CTSBP07858 339 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 SLFN14P0C7P3 912 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 SOX9P48436 509 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 REC114Q7Z4M0 266 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 RNF208Q9H0X6 261 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 USP35Q9P2H5 1018 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 ADAMTS8Q9UP79 889 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 TACC3Q9Y6A5 838 aa7.74□□□□□ -1.17
RFC4-212ENST00000479307 ZNF862O60290 1169 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 FGRP09769 529 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 ATP2B1P20020 1258 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 CRKP46108 304 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
RFC4-212ENST00000479307 MPRIPQ6WCQ1 1025 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 ALYREFQ86V81 257 aaKnown RBP7.73□□□□□ -1.17
RFC4-212ENST00000479307 REXO1Q8N1G1 1221 aaKnown RBP7.73□□□□□ -1.17
RFC4-212ENST00000479307 UBXN4Q92575 508 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.73□□□□□ -1.17
RFC4-212ENST00000479307 WDR18Q9BV38 432 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 RUSC1Q9BVN2 902 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 TMPRSS13Q9BYE2 586 aa7.73□□□□□ -1.17
RFC4-212ENST00000479307 AOC2O75106 756 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 LIG1P18858 919 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 ZNF165P49910 485 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
RFC4-212ENST00000479307 HDXQ7Z353 690 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 NACC1Q96RE7 527 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 SUGCTQ9HAC7 445 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 CYP4F12Q9HCS2 524 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 EFR3BQ9Y2G0 817 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
RFC4-212ENST00000479307 ZNF608Q9ULD9 1512 aaPredicted RBP7.72□□□□□ -1.17
RFC4-212ENST00000479307 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.17
RFC4-212ENST00000479307 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 WISP1O95388 367 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 DLGAP3O95886 979 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 NASPP49321 788 aaPredicted RBP7.71□□□□□ -1.18
RFC4-212ENST00000479307 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 ZC3H12AQ5D1E8 599 aaKnown RBP7.71□□□□□ -1.18
RFC4-212ENST00000479307 NUTM2GQ5VZR2 741 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
RFC4-212ENST00000479307 KIAA1211Q6ZU35 1233 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 FBXO27Q8NI29 283 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 ELMO3Q96BJ8 720 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 GINM1Q9NU53 330 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 PCDHGC5Q9Y5F6 944 aa7.71□□□□□ -1.18
RFC4-212ENST00000479307 GFRA2O00451 464 aa7.7□□□□□ -1.18
RFC4-212ENST00000479307 TLR3O15455 904 aaKnown RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 IGSF3O75054 1194 aa7.7□□□□□ -1.18
RFC4-212ENST00000479307 IMPDH2P12268 514 aa7.7□□□□□ -1.18
RFC4-212ENST00000479307 NRG1Q02297 640 aaPredicted RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 WIPI1Q5MNZ9 446 aaPredicted RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 LRFN4Q6PJG9 635 aa7.7□□□□□ -1.18
RFC4-212ENST00000479307 SMG8Q8ND04 991 aaKnown RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 LENG1Q96BZ8 264 aaPredicted RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 WDR89Q96FK6 387 aaPredicted RBP7.7□□□□□ -1.18
RFC4-212ENST00000479307 SELPP16109 830 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 ERVK-24P63145 666 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 ID3Q02535 119 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 ANKRD34AQ69YU3 496 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 CYFIP1Q7L576 1253 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 PLPPR2Q96GM1 343 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 BRMS1Q9HCU9 246 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 PRR36Q9H6K5 1346 aa7.69□□□□□ -1.18
RFC4-212ENST00000479307 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 C9orf172C9J069 976 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 F8W735 103 aaPredicted RBP7.68□□□□□ -1.18
RFC4-212ENST00000479307 TMPRSS2O15393 492 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 ATE1O95260 518 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 APBA3O96018 575 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFC4-212ENST00000479307 MCM4P33991 863 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 PDE4BQ07343 736 aa7.68□□□□□ -1.18
RFC4-212ENST00000479307 INPP5AQ14642 412 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms