RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 TCP10Q12799 353 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 DCAF15Q66K64 600 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 CLMNQ96JQ2 1002 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 HAUS7Q99871 368 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 IGHDP01880 384 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 INHBEP58166 350 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 FOCADQ5VW36 1801 aa12.11□□□□□ -0.47
SCAMP3-206ENST00000478737 DDTLA6NHG4 134 aaPredicted RBP12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 TBC1D12O60347 775 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 CYP7A1P22680 504 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 VGLL4Q14135 290 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 MIGA2Q7L4E1 593 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 ZNF341Q9BYN7 854 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCAMP3-206ENST00000478737 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 PHF20L1A8MW92 1017 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 GOLIM4O00461 696 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 GJA5P36382 358 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 NOL10Q9BSC4 688 aaKnown RBP12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 DHX36Q9H2U1 1008 aaKnown RBP12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
SCAMP3-206ENST00000478737 COL2A1P02458 1487 aaPredicted RBP12.08□□□□□ -0.47
SCAMP3-206ENST00000478737 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 SPDYE5A6NIY4 337 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 PDE6AP16499 860 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 LBX1P52954 281 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 SREBF2Q12772 1141 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 NOL9Q5SY16 702 aaKnown RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 SLC9C2Q5TAH2 1124 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 COL13A1Q5TAT6 717 aaPredicted RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 ERO1BQ86YB8 467 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 TEX11Q8IYF3 940 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 ZKSCAN4Q969J2 545 aaPredicted RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 MS4A4AQ96JQ5 239 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 WRNIP1Q96S55 665 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 CSADQ9Y600 493 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
SCAMP3-206ENST00000478737 INPP5BP32019 993 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 PICALMQ13492 652 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 EDC3Q96F86 508 aaKnown RBP12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 LNPKQ9C0E8 428 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 PI4KBQ9UBF8 816 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 SALL3Q9BXA9 1300 aa12.07□□□□□ -0.48
SCAMP3-206ENST00000478737 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 TRPA1O75762 1119 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 ADD2P35612 726 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 PPATQ06203 517 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 NOM1Q5C9Z4 860 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 PTPN18Q99952 460 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 STAP2Q9UGK3 403 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 FLT1P17948 1338 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 ZNF532Q9HCE3 1301 aa12.06□□□□□ -0.48
SCAMP3-206ENST00000478737 MYH1P12882 1939 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 IRF6O14896 467 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 MX1P20591 662 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 GTF2A2P52657 109 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 NUCB1Q02818 461 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 PPIL2Q13356 520 aa12.05□□□□□ -0.48
SCAMP3-206ENST00000478737 TSHZ3Q63HK5 1081 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms