RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TRIM27P14373 513 aa20.7■□□□□ 0.9
TRIM13-208ENST00000478111 KIF22Q14807 665 aa20.7■□□□□ 0.9
TRIM13-208ENST00000478111 SH3TC2Q8TF17 1288 aa20.7■□□□□ 0.9
TRIM13-208ENST00000478111 AKAP2Q9Y2D5 859 aa20.7■□□□□ 0.9
TRIM13-208ENST00000478111 DOCK1Q14185 1865 aa20.69■□□□□ 0.9
TRIM13-208ENST00000478111 CXCL11O14625 94 aa20.69■□□□□ 0.9
TRIM13-208ENST00000478111 BCAR3O75815 825 aa20.69■□□□□ 0.9
TRIM13-208ENST00000478111 DZIP1Q86YF9 867 aaKnown RBP20.69■□□□□ 0.9
TRIM13-208ENST00000478111 TRIM47Q96LD4 638 aa20.69■□□□□ 0.9
TRIM13-208ENST00000478111 BTDP43251 543 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 RHBDL3P58872 404 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 MECOMQ03112 1051 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 MVPQ14764 893 aaKnown RBP20.68■□□□□ 0.9
TRIM13-208ENST00000478111 SPTY2D1Q68D10 685 aaPredicted RBP20.68■□□□□ 0.9
TRIM13-208ENST00000478111 SCYL3Q8IZE3 742 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 HMG20BQ9P0W2 317 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
TRIM13-208ENST00000478111 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 ECM2O94769 699 aaPredicted RBP20.67■□□□□ 0.9
TRIM13-208ENST00000478111 PTPRAP18433 802 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 PSMC4P43686 418 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 PRMT2P55345 433 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 PI16Q6UXB8 463 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 SLF2Q8IX21 1173 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 NEUROD6Q96NK8 337 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 AFG3L2Q9Y4W6 797 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 ZHX2Q9Y6X8 837 aa20.67■□□□□ 0.9
TRIM13-208ENST00000478111 A0A0G2JLL6 359 aaPredicted RBP20.66■□□□□ 0.9
TRIM13-208ENST00000478111 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
TRIM13-208ENST00000478111 MYCP01106 439 aaPredicted RBP20.66■□□□□ 0.9
TRIM13-208ENST00000478111 GNAI2P04899 355 aa20.66■□□□□ 0.9
TRIM13-208ENST00000478111 BCRP11274 1271 aa20.66■□□□□ 0.9
TRIM13-208ENST00000478111 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
TRIM13-208ENST00000478111 PRRT2Q7Z6L0 340 aaPredicted RBP20.66■□□□□ 0.9
TRIM13-208ENST00000478111 SRRDQ9UH36 339 aa20.66■□□□□ 0.9
TRIM13-208ENST00000478111 CYP2C8P10632 490 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 OSBPP22059 807 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 TBC1D9Q6ZT07 1266 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 ZSCAN29Q8IWY8 852 aaPredicted RBP20.65■□□□□ 0.9
TRIM13-208ENST00000478111 SPATA5Q8NB90 893 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 NSUN4Q96CB9 384 aaKnown RBP20.65■□□□□ 0.9
TRIM13-208ENST00000478111 PCDH10Q9P2E7 1040 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 DOCK3Q8IZD9 2030 aa20.65■□□□□ 0.9
TRIM13-208ENST00000478111 CTNND1O60716 968 aaKnown RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 ARID4AP29374 1257 aaPredicted RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 PICALMQ13492 652 aa20.64■□□□□ 0.89
TRIM13-208ENST00000478111 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 CLUAP1Q96AJ1 413 aa20.64■□□□□ 0.89
TRIM13-208ENST00000478111 PARK7Q99497 189 aaKnown RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 PICK1Q9NRD5 415 aa20.64■□□□□ 0.89
TRIM13-208ENST00000478111 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.89
TRIM13-208ENST00000478111 ATAD5Q96QE3 1844 aa20.63■□□□□ 0.89
TRIM13-208ENST00000478111 TBC1D12O60347 775 aa20.63■□□□□ 0.89
TRIM13-208ENST00000478111 MTFR1Q15390 333 aa20.63■□□□□ 0.89
TRIM13-208ENST00000478111 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.63■□□□□ 0.89
TRIM13-208ENST00000478111 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
TRIM13-208ENST00000478111 MCAMP43121 646 aa20.62■□□□□ 0.89
TRIM13-208ENST00000478111 FASTKD5Q7L8L6 764 aaKnown RBP20.62■□□□□ 0.89
TRIM13-208ENST00000478111 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
TRIM13-208ENST00000478111 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
TRIM13-208ENST00000478111 HOXD10P28358 340 aa20.61■□□□□ 0.89
TRIM13-208ENST00000478111 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRIM13-208ENST00000478111 CCDC84Q86UT8 332 aaPredicted RBP20.61■□□□□ 0.89
TRIM13-208ENST00000478111 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
TRIM13-208ENST00000478111 RANBP2P49792 3224 aaKnown RBP20.61■□□□□ 0.89
TRIM13-208ENST00000478111 SIPA1L1O43166 1804 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 MYPNQ86TC9 1320 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 MAP4K4O95819 1239 aaPredicted RBP20.6■□□□□ 0.89
TRIM13-208ENST00000478111 LDHCP07864 332 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 GRK4P32298 578 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 POLA2Q14181 598 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 HABP4Q5JVS0 413 aaKnown RBP20.6■□□□□ 0.89
TRIM13-208ENST00000478111 GORABQ5T7V8 394 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 GADL1Q6ZQY3 521 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 SHISA4Q96DD7 197 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 SLC45A1Q9Y2W3 748 aa20.6■□□□□ 0.89
TRIM13-208ENST00000478111 COL2A1P02458 1487 aaPredicted RBP20.6■□□□□ 0.89
TRIM13-208ENST00000478111 TRIM75PA6NK02 468 aa20.59■□□□□ 0.89
TRIM13-208ENST00000478111 GSTO1P78417 241 aa20.59■□□□□ 0.89
TRIM13-208ENST00000478111 PRKCZQ05513 592 aa20.59■□□□□ 0.89
TRIM13-208ENST00000478111 RAET1EQ8TD07 263 aa20.59■□□□□ 0.89
TRIM13-208ENST00000478111 RAI14Q9P0K7 980 aa20.59■□□□□ 0.89
TRIM13-208ENST00000478111 FCGRTP55899 365 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 RRP1BQ14684 758 aaKnown RBP20.58■□□□□ 0.89
TRIM13-208ENST00000478111 ZKSCAN2Q63HK3 967 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 SSH3Q8TE77 659 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 OSBPL5Q9H0X9 879 aaPredicted RBP20.58■□□□□ 0.89
TRIM13-208ENST00000478111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRIM13-208ENST00000478111 GPR108Q9NPR9 543 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 GABRQQ9UN88 632 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 LOC285556D6RIA3 1793 aa20.58■□□□□ 0.89
TRIM13-208ENST00000478111 TRIOBPQ9H2D6 2365 aa20.58■□□□□ 0.88
TRIM13-208ENST00000478111 FOCADQ5VW36 1801 aa20.57■□□□□ 0.88
TRIM13-208ENST00000478111 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
TRIM13-208ENST00000478111 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms