RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FAM196BA6NMK8 535 aa21.56■■□□□ 1.04
PTPN7-209ENST00000477554 MAP3K9P80192 1104 aa21.56■■□□□ 1.04
PTPN7-209ENST00000477554 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
PTPN7-209ENST00000477554 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.56■■□□□ 1.04
PTPN7-209ENST00000477554 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
PTPN7-209ENST00000477554 IGF2BP3O00425 579 aaKnown RBP eCLIP21.55■■□□□ 1.04
PTPN7-209ENST00000477554 IDH1O75874 414 aaKnown RBP21.55■■□□□ 1.04
PTPN7-209ENST00000477554 TBC1D8O95759 1140 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
PTPN7-209ENST00000477554 TSHZ3Q63HK5 1081 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 DCTPP1Q9H773 170 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 TM4SF4P48230 202 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 TNS4Q8IZW8 715 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 MIGA1Q8NAN2 632 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 PTPN18Q99952 460 aa21.55■■□□□ 1.04
PTPN7-209ENST00000477554 GSTO1P78417 241 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 SLF2Q8IX21 1173 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 MAGEB6Q8N7X4 407 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 OTUD5Q96G74 571 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 DNAJC2Q99543 621 aaKnown RBP21.54■■□□□ 1.04
PTPN7-209ENST00000477554 LRRCC1Q9C099 1032 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 BOLA2Q9H3K6 86 aa21.54■■□□□ 1.04
PTPN7-209ENST00000477554 FOCADQ5VW36 1801 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 GOLIM4O00461 696 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 ENTPD3O75355 529 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 CYP7A1P22680 504 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 TEX11Q8IYF3 940 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 OTUD7AQ8TE49 926 aaPredicted RBP21.53■■□□□ 1.04
PTPN7-209ENST00000477554 MS4A4AQ96JQ5 239 aa21.53■■□□□ 1.04
PTPN7-209ENST00000477554 PHF20L1A8MW92 1017 aa21.52■■□□□ 1.04
PTPN7-209ENST00000477554 LDHCP07864 332 aa21.52■■□□□ 1.04
PTPN7-209ENST00000477554 ZBTB48P10074 688 aaPredicted RBP21.52■■□□□ 1.04
PTPN7-209ENST00000477554 AAMPQ13685 434 aa21.52■■□□□ 1.04
PTPN7-209ENST00000477554 ZSCAN29Q8IWY8 852 aaPredicted RBP21.52■■□□□ 1.04
PTPN7-209ENST00000477554 ZNF341Q9BYN7 854 aa21.52■■□□□ 1.04
PTPN7-209ENST00000477554 ZNF112Q9UJU3 913 aa21.52■■□□□ 1.04
PTPN7-209ENST00000477554 CA12O43570 354 aa21.51■■□□□ 1.03
PTPN7-209ENST00000477554 RRP1BQ14684 758 aaKnown RBP21.51■■□□□ 1.03
PTPN7-209ENST00000477554 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
PTPN7-209ENST00000477554 MAPKAPK5Q8IW41 473 aa21.51■■□□□ 1.03
PTPN7-209ENST00000477554 OSBPL5Q9H0X9 879 aaPredicted RBP21.51■■□□□ 1.03
PTPN7-209ENST00000477554 SAGE1Q9NXZ1 904 aa21.51■■□□□ 1.03
PTPN7-209ENST00000477554 CCDC84Q86UT8 332 aaPredicted RBP21.5■■□□□ 1.03
PTPN7-209ENST00000477554 IFNL1Q8IU54 200 aa21.5■■□□□ 1.03
PTPN7-209ENST00000477554 EXOC6Q8TAG9 804 aa21.5■■□□□ 1.03
PTPN7-209ENST00000477554 TGFBRAP1Q8WUH2 860 aa21.5■■□□□ 1.03
PTPN7-209ENST00000477554 BRI3BPQ8WY22 251 aa21.5■■□□□ 1.03
PTPN7-209ENST00000477554 CSADQ9Y600 493 aa21.5■■□□□ 1.03
PTPN7-209ENST00000477554 SPDYE5A6NIY4 337 aa21.49■■□□□ 1.03
PTPN7-209ENST00000477554 UNCXA6NJT0 531 aa21.49■■□□□ 1.03
PTPN7-209ENST00000477554 IRF6O14896 467 aa21.49■■□□□ 1.03
PTPN7-209ENST00000477554 PPP4CP60510 307 aa21.49■■□□□ 1.03
PTPN7-209ENST00000477554 SHROOM1Q2M3G4 852 aaPredicted RBP21.49■■□□□ 1.03
PTPN7-209ENST00000477554 DCAF15Q66K64 600 aa21.49■■□□□ 1.03
PTPN7-209ENST00000477554 MANSC4A6NHS7 340 aaPredicted RBP21.48■■□□□ 1.03
PTPN7-209ENST00000477554 ATP5JP18859 108 aa21.48■■□□□ 1.03
PTPN7-209ENST00000477554 EVX2Q03828 476 aa21.48■■□□□ 1.03
PTPN7-209ENST00000477554 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
PTPN7-209ENST00000477554 SAP30BPQ9UHR5 308 aaKnown RBP21.48■■□□□ 1.03
PTPN7-209ENST00000477554 FLT1P17948 1338 aa21.48■■□□□ 1.03
PTPN7-209ENST00000477554 TCRBV5S4A2TA0A5A2 114 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 CAPN15O75808 1086 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 PDE6AP16499 860 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 MAP3K10Q02779 954 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 SREBF2Q12772 1141 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTPN7-209ENST00000477554 PHIPQ8WWQ0 1821 aa21.47■■□□□ 1.03
PTPN7-209ENST00000477554 CAP1Q01518 475 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 HAUS7Q99871 368 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 RIOK1Q9BRS2 568 aaKnown RBP21.46■■□□□ 1.03
PTPN7-209ENST00000477554 DNAJC18Q9H819 358 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 PALD1Q9ULE6 856 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 TESPA1A2RU30 521 aaPredicted RBP21.46■■□□□ 1.03
PTPN7-209ENST00000477554 JAG1P78504 1218 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 SLC9C2Q5TAH2 1124 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 ERO1BQ86YB8 467 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 REM2Q8IYK8 340 aaPredicted RBP21.46■■□□□ 1.03
PTPN7-209ENST00000477554 FAM43AQ8N2R8 423 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 PAG1Q9NWQ8 432 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 ZNF532Q9HCE3 1301 aa21.46■■□□□ 1.03
PTPN7-209ENST00000477554 DOCK1Q14185 1865 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 NPM3O75607 178 aaKnown RBP21.45■■□□□ 1.02
PTPN7-209ENST00000477554 MYH1P12882 1939 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 MAP3K12Q12852 859 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 CCL15Q16663 113 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 DDX60LQ5H9U9 1706 aaKnown RBP21.45■■□□□ 1.02
PTPN7-209ENST00000477554 ZNF296Q8WUU4 475 aaPredicted RBP21.45■■□□□ 1.02
PTPN7-209ENST00000477554 HOOK2Q96ED9 719 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
PTPN7-209ENST00000477554 ATAD5Q96QE3 1844 aa21.44■■□□□ 1.02
PTPN7-209ENST00000477554 HTTP42858 3142 aa21.44■■□□□ 1.02
PTPN7-209ENST00000477554 COL2A1P02458 1487 aaPredicted RBP21.44■■□□□ 1.02
PTPN7-209ENST00000477554 BAG3O95817 575 aa21.44■■□□□ 1.02
PTPN7-209ENST00000477554 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
PTPN7-209ENST00000477554 MOGSQ13724 837 aa21.44■■□□□ 1.02
PTPN7-209ENST00000477554 NOL9Q5SY16 702 aaKnown RBP21.44■■□□□ 1.02
PTPN7-209ENST00000477554 NOL10Q9BSC4 688 aaKnown RBP21.44■■□□□ 1.02
PTPN7-209ENST00000477554 MYH7P12883 1935 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms