RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 DDX4Q9NQI0 724 aaKnown RBP14.05□□□□□ -0.16
HDLBP-236ENST00000477477 PNMA6EA0A0J9YXQ4 647 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 CXCL11O14625 94 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 PRMT2P55345 433 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 MAP3K10Q02779 954 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 MECOMQ03112 1051 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 ZNF384Q8TF68 577 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 NEUROD6Q96NK8 337 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 HMG20BQ9P0W2 317 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
HDLBP-236ENST00000477477 KIAA0100Q14667 2235 aaKnown RBP14.04□□□□□ -0.16
HDLBP-236ENST00000477477 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 DDTLA6NHG4 134 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-236ENST00000477477 PTPRAP18433 802 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 CTGFP29279 349 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 ARID4AP29374 1257 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-236ENST00000477477 RHBDL3P58872 404 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 PICALMQ13492 652 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 GPAT2Q6NUI2 795 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 PI16Q6UXB8 463 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 SPATA5Q8NB90 893 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 SH3TC2Q8TF17 1288 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
HDLBP-236ENST00000477477 PICK1Q9NRD5 415 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 DOCK2Q92608 1830 aa14.03□□□□□ -0.16
HDLBP-236ENST00000477477 MYH2Q9UKX2 1941 aa14.02□□□□□ -0.16
HDLBP-236ENST00000477477 ZSWIM8A7E2V4 1837 aa14.02□□□□□ -0.16
HDLBP-236ENST00000477477 A0A0G2JLL6 359 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-236ENST00000477477 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
HDLBP-236ENST00000477477 ECM2O94769 699 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-236ENST00000477477 SLURP2P0DP57 97 aa14.02□□□□□ -0.17
HDLBP-236ENST00000477477 PSMC4P43686 418 aa14.02□□□□□ -0.17
HDLBP-236ENST00000477477 G3BP1Q13283 466 aaKnown RBP eCLIP14.02□□□□□ -0.177e-13■■■□□ 17.4
HDLBP-236ENST00000477477 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
HDLBP-236ENST00000477477 GORABQ5T7V8 394 aa14.02□□□□□ -0.17
HDLBP-236ENST00000477477 PRRT2Q7Z6L0 340 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-236ENST00000477477 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.17
HDLBP-236ENST00000477477 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.17
HDLBP-236ENST00000477477 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
HDLBP-236ENST00000477477 GSTO1P78417 241 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 TBC1D9Q6ZT07 1266 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 FASTKD5Q7L8L6 764 aaKnown RBP14.01□□□□□ -0.17
HDLBP-236ENST00000477477 TMEM57Q8N5G2 664 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 SRRDQ9UH36 339 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 AFG3L2Q9Y4W6 797 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 AK9Q5TCS8 1911 aa14.01□□□□□ -0.17
HDLBP-236ENST00000477477 TBC1D12O60347 775 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 FMNL1O95466 1100 aaPredicted RBP14□□□□□ -0.17
HDLBP-236ENST00000477477 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
HDLBP-236ENST00000477477 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
HDLBP-236ENST00000477477 LDHCP07864 332 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 CYP2C8P10632 490 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 BCRP11274 1271 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 OSBPP22059 807 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 HOXD10P28358 340 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 MCAMP43121 646 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 POLA2Q14181 598 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 RAI14Q9P0K7 980 aa14□□□□□ -0.17
HDLBP-236ENST00000477477 COL2A1P02458 1487 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-236ENST00000477477 GADL1Q6ZQY3 521 aa13.99□□□□□ -0.17
HDLBP-236ENST00000477477 GCC1Q96CN9 775 aa13.99□□□□□ -0.17
HDLBP-236ENST00000477477 GPR108Q9NPR9 543 aa13.99□□□□□ -0.17
HDLBP-236ENST00000477477 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-236ENST00000477477 SLC45A1Q9Y2W3 748 aa13.99□□□□□ -0.17
HDLBP-236ENST00000477477 MYPNQ86TC9 1320 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 FCGRTP55899 365 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 TNNI3KQ59H18 835 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 CCDC84Q86UT8 332 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-236ENST00000477477 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-236ENST00000477477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.98□□□□□ -0.173e-9■□□□□ 8.7
HDLBP-236ENST00000477477 LRP2BPQ9P2M1 347 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 FPGT-TNNI3KV9GXZ4 949 aa13.98□□□□□ -0.17
HDLBP-236ENST00000477477 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 GRK4P32298 578 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 PRKCZQ05513 592 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 MTFR1Q15390 333 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 TEX11Q8IYF3 940 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
HDLBP-236ENST00000477477 ATP8B2P98198 1209 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDLBP-236ENST00000477477 OS9Q13438 667 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-236ENST00000477477 CCDC158Q5M9N0 1113 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 TTC39AQ5SRH9 613 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-236ENST00000477477 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
HDLBP-236ENST00000477477 SH3RF3Q8TEJ3 882 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-236ENST00000477477 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.17
HDLBP-236ENST00000477477 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms