RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 FZD6O60353 706 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 BMP3P12645 472 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 NLRP12P59046 1061 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 ALKBH2Q6NS38 261 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 BEND4Q6ZU67 534 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 VN1R5Q7Z5H4 357 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 PCGF6Q9BYE7 350 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 FOXD3Q9UJU5 478 aaPredicted RBP6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 ADAMTSL3P82987 1691 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 RIMS1Q86UR5 1692 aaKnown RBP6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 MADDQ8WXG6 1647 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 RNF17Q9BXT8 1623 aaKnown RBP6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 SOX1O00570 391 aaPredicted RBP6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 C8AP07357 584 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 PREPP48147 710 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 CEBPAP49715 358 aaPredicted RBP6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 TTC16Q8NEE8 873 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 SLC7A3Q8WY07 619 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 RAB3GAP2Q9H2M9 1393 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 PTPRMP28827 1452 aa6.51□□□□□ -1.37
NSMCE4A-208ENST00000477289 PRDM15P57071 1507 aaPredicted RBP6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 MROH2AA6NES4 1674 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 CLTCQ00610 1675 aaKnown RBP6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 SART1O43290 800 aaKnown RBP6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 PHACTR2O75167 634 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 C19orf57Q0VDD7 668 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 PEAR1Q5VY43 1037 aaPredicted RBP6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 ANKRD34AQ69YU3 496 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 POU5F2Q8N7G0 328 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 SNX29Q8TEQ0 813 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 BSNDQ8WZ55 320 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 RNF208Q9H0X6 261 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 LATS2Q9NRM7 1088 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 SLC52A1Q9NWF4 448 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 PIM2Q9P1W9 311 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 ANGEL1Q9UNK9 670 aaKnown RBP6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 NPATQ14207 1427 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 UHRF1BP1Q6BDS2 1440 aa6.5□□□□□ -1.37
NSMCE4A-208ENST00000477289 UNC13BO14795 1591 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 PZPP20742 1482 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 TNRQ92752 1358 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 FAM13AO94988 1023 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 GJD3Q8N144 294 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 MPHOSPH9Q99550 1183 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 RUSC1Q9BVN2 902 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 BHLHE41Q9C0J9 482 aaPredicted RBP6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 ABCC3O15438 1527 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 ARHGAP31Q2M1Z3 1444 aa6.49□□□□□ -1.37
NSMCE4A-208ENST00000477289 RPRD2Q5VT52 1461 aaKnown RBP6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 DEPDC5O75140 1603 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 DLGAP3O95886 979 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 EDN3P14138 238 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 EHHADHQ08426 723 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 ZNF211Q13398 564 aaPredicted RBP6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 SF3B2Q13435 895 aaKnown RBP6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 AAMPQ13685 434 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 IKBKEQ14164 716 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 CBLL1Q75N03 491 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 THEMISQ8N1K5 641 aaPredicted RBP6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 LMTK2Q8IWU2 1503 aa6.48□□□□□ -1.37
NSMCE4A-208ENST00000477289 CEP152O94986 1710 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 CAMSAP1Q5T5Y3 1602 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 TET3O43151 1660 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 USP5P45974 858 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 ARL4DP49703 201 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 MSMPQ1L6U9 139 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 ZNF326Q5BKZ1 582 aaKnown RBP6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 TMPRSS13Q9BYE2 586 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 ZFYVE28Q9HCC9 887 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 CCDC39Q9UFE4 941 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 HIF3AQ9Y2N7 669 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 EID1Q9Y6B2 187 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 SETD1BQ9UPS6 1966 aaKnown RBP6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 SIGLEC1Q9BZZ2 1709 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 NLRP1Q9C000 1473 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 IQGAP3Q86VI3 1631 aa6.47□□□□□ -1.37
NSMCE4A-208ENST00000477289 C3P01024 1663 aa6.46□□□□□ -1.37
NSMCE4A-208ENST00000477289 LOC100289279A0A1B0GTE1 492 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 METTL12A8MUP2 240 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 ABL1P00519 1130 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 LCE4AQ5TA78 99 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 FDX2Q6P4F2 183 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 ASAP3Q8TDY4 903 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 SOX17Q9H6I2 414 aaPredicted RBP6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.38
NSMCE4A-208ENST00000477289 EFCAB6Q5THR3 1501 aa6.45□□□□□ -1.38
NSMCE4A-208ENST00000477289 VWDEQ8N2E2 1590 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms