RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ZFPM1Q8IX07 1006 aa19.5■□□□□ 0.71
SMG5-204ENST00000476954 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
SMG5-204ENST00000476954 LAMA2P24043 3122 aaKnown RBP19.49■□□□□ 0.71
SMG5-204ENST00000476954 DOCK2Q92608 1830 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 SLURP2P0DP57 97 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 FKBP5Q13451 457 aaPredicted RBP19.49■□□□□ 0.71
SMG5-204ENST00000476954 RALBP1Q15311 655 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
SMG5-204ENST00000476954 TBC1D22AQ8WUA7 517 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 MRIQ9BWK5 157 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 CHMP4AQ9BY43 222 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 AFG3L2Q9Y4W6 797 aa19.49■□□□□ 0.71
SMG5-204ENST00000476954 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
SMG5-204ENST00000476954 COL6A1P12109 1028 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 MYLIPQ8WY64 445 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 FAM198AQ9UFP1 575 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 GJD2Q9UKL4 321 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 SLC45A1Q9Y2W3 748 aa19.48■□□□□ 0.71
SMG5-204ENST00000476954 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 PTPRAP18433 802 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
SMG5-204ENST00000476954 TREML2Q5T2D2 321 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 CDC42EP5Q6NZY7 148 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 HHIPL2Q6UWX4 724 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 SCYL3Q8IZE3 742 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 TRIB2Q92519 343 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 DOCK1Q14185 1865 aa19.47■□□□□ 0.71
SMG5-204ENST00000476954 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
SMG5-204ENST00000476954 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
SMG5-204ENST00000476954 TRIM75PA6NK02 468 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 F6X3S4 739 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 DIXDC1Q155Q3 683 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 FAM110CQ1W6H9 321 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
SMG5-204ENST00000476954 PICK1Q9NRD5 415 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 DAGLAQ9Y4D2 1042 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 MYH13Q9UKX3 1938 aa19.45■□□□□ 0.7
SMG5-204ENST00000476954 MAST3O60307 1309 aa19.44■□□□□ 0.7
SMG5-204ENST00000476954 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
SMG5-204ENST00000476954 MAST2Q6P0Q8 1798 aa19.44■□□□□ 0.7
SMG5-204ENST00000476954 PRKAR2AP13861 404 aaKnown RBP19.43■□□□□ 0.7
SMG5-204ENST00000476954 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
SMG5-204ENST00000476954 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
SMG5-204ENST00000476954 TTYH1Q9H313 450 aaPredicted RBP19.43■□□□□ 0.7
SMG5-204ENST00000476954 AGTPBP1Q9UPW5 1226 aa19.43■□□□□ 0.7
SMG5-204ENST00000476954 LTBP2Q14767 1821 aa19.43■□□□□ 0.7
SMG5-204ENST00000476954 FRMPD3Q5JV73 1810 aa19.42■□□□□ 0.7
SMG5-204ENST00000476954 CYP2B6P20813 491 aa19.42■□□□□ 0.7
SMG5-204ENST00000476954 SYMPKQ92797 1274 aaKnown RBP19.42■□□□□ 0.7
SMG5-204ENST00000476954 PEX10O60683 326 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 LRRC24Q50LG9 513 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 CAVIN4Q5BKX8 364 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 SH3BP5LQ7L8J4 393 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 LBHD1Q9BQE6 289 aaPredicted RBP19.41■□□□□ 0.7
SMG5-204ENST00000476954 USP40Q9NVE5 1235 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
SMG5-204ENST00000476954 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 TNFRSF10AO00220 468 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 GRM8O00222 908 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 CCND3P30281 292 aaPredicted RBP19.4■□□□□ 0.7
SMG5-204ENST00000476954 PLA2G5P39877 138 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 SHHQ15465 462 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 C9orf50Q5SZB4 431 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 SUGT1Q9Y2Z0 365 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
SMG5-204ENST00000476954 FOSL2P15408 326 aa19.39■□□□□ 0.69
SMG5-204ENST00000476954 LHX8Q68G74 356 aa19.39■□□□□ 0.69
SMG5-204ENST00000476954 KAZALD1Q96I82 304 aa19.39■□□□□ 0.69
SMG5-204ENST00000476954 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.69
SMG5-204ENST00000476954 NCOR1O75376 2440 aa19.39■□□□□ 0.69
SMG5-204ENST00000476954 RGS3P49796 1198 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 CACNB2Q08289 660 aaPredicted RBP19.38■□□□□ 0.69
SMG5-204ENST00000476954 METTL24Q5JXM2 366 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 VGLL2Q8N8G2 317 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 LRRFIP2Q9Y608 721 aaKnown RBP19.38■□□□□ 0.69
SMG5-204ENST00000476954 BDP1A6H8Y1 2624 aa19.38■□□□□ 0.69
SMG5-204ENST00000476954 PNMA3Q9UL41 463 aa19.37■□□□□ 0.69
SMG5-204ENST00000476954 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
SMG5-204ENST00000476954 PRDX5P30044 214 aa19.36■□□□□ 0.69
SMG5-204ENST00000476954 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
SMG5-204ENST00000476954 ATN1P54259 1190 aaPredicted RBP19.36■□□□□ 0.69
SMG5-204ENST00000476954 CCL14Q16627 93 aa19.36■□□□□ 0.69
SMG5-204ENST00000476954 TJAP1Q5JTD0 557 aa19.36■□□□□ 0.69
SMG5-204ENST00000476954 ASCC2Q9H1I8 757 aaPredicted RBP19.36■□□□□ 0.69
SMG5-204ENST00000476954 CDH23Q9H251 3354 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 MUC3AQ02505 3323 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 TMEM265A0A087WTH1 108 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 CTNND1O60716 968 aaKnown RBP19.35■□□□□ 0.69
SMG5-204ENST00000476954 PDE8BO95263 885 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 MAP3K10Q02779 954 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 FAM122AQ96E09 287 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 SENP6Q9GZR1 1112 aaPredicted RBP19.35■□□□□ 0.69
SMG5-204ENST00000476954 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
SMG5-204ENST00000476954 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 DNAH12Q6ZR08 3092 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
SMG5-204ENST00000476954 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms