RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 RTL9Q8NET4 1388 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 SKILP12757 684 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 MPHOSPH8Q99549 860 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 UTP14AQ9BVJ6 771 aaKnown RBP24.36■■□□□ 1.49
LIMS2-214ENST00000476932 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.36■■□□□ 1.49
LIMS2-214ENST00000476932 OSBPL5Q9H0X9 879 aaPredicted RBP24.36■■□□□ 1.49
LIMS2-214ENST00000476932 NRAPQ86VF7 1730 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 SMTNL1A8MU46 457 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 IFIT3O14879 490 aaKnown RBP24.36■■□□□ 1.49
LIMS2-214ENST00000476932 CAMTA2O94983 1202 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 TUBE1Q9UJT0 475 aa24.36■■□□□ 1.49
LIMS2-214ENST00000476932 MYH6P13533 1939 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 SYKP43405 635 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 CRKLP46109 303 aaKnown RBP24.35■■□□□ 1.49
LIMS2-214ENST00000476932 BCAMP50895 628 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 TPD52L1Q16890 204 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-214ENST00000476932 ANKRD7Q92527 254 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 CNNM2Q9H8M5 875 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 SLC12A7Q9Y666 1083 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 FMNL1O95466 1100 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-214ENST00000476932 ZRSR1Q15695 479 aaKnown RBP24.35■■□□□ 1.49
LIMS2-214ENST00000476932 RESP18Q5W5W9 173 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 STAG1Q8WVM7 1258 aa24.35■■□□□ 1.49
LIMS2-214ENST00000476932 NTSR2O95665 410 aa24.34■■□□□ 1.49
LIMS2-214ENST00000476932 SLC26A6Q9BXS9 759 aa24.34■■□□□ 1.49
LIMS2-214ENST00000476932 XPO4Q9C0E2 1151 aaKnown RBP24.34■■□□□ 1.49
LIMS2-214ENST00000476932 HSD3B7Q9H2F3 369 aa24.34■■□□□ 1.49
LIMS2-214ENST00000476932 TAOK2Q9UL54 1235 aa24.34■■□□□ 1.49
LIMS2-214ENST00000476932 IFNAR1P17181 557 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 NYAP1Q6ZVC0 841 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 CLIC6Q96NY7 704 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 ARID3AQ99856 593 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.33■■□□□ 1.49
LIMS2-214ENST00000476932 AHDC1Q5TGY3 1603 aaPredicted RBP24.33■■□□□ 1.49
LIMS2-214ENST00000476932 GUCY1A2P33402 732 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 JMYQ8N9B5 988 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 CCDC94Q9BW85 323 aaPredicted RBP24.33■■□□□ 1.49
LIMS2-214ENST00000476932 KRT23Q9C075 422 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 IFNKQ9P0W0 207 aa24.33■■□□□ 1.49
LIMS2-214ENST00000476932 GSDMDP57764 484 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 SSRP1Q08945 709 aaKnown RBP24.32■■□□□ 1.48
LIMS2-214ENST00000476932 GNL2Q13823 731 aaKnown RBP24.32■■□□□ 1.48
LIMS2-214ENST00000476932 MFSD6Q6ZSS7 791 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 KCND1Q9NSA2 647 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 IMPACTQ9P2X3 320 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 TAF1P21675 1872 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
LIMS2-214ENST00000476932 CACNA1SQ13698 1873 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 ITPK1Q13572 414 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 TRIM29Q14134 588 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 CCDC152Q4G0S7 254 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 PARP10Q53GL7 1025 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 SLC4A4Q9Y6R1 1079 aa24.32■■□□□ 1.48
LIMS2-214ENST00000476932 GNAT2P19087 354 aa24.31■■□□□ 1.48
LIMS2-214ENST00000476932 IKBKBO14920 756 aa24.31■■□□□ 1.48
LIMS2-214ENST00000476932 TDO2P48775 406 aa24.31■■□□□ 1.48
LIMS2-214ENST00000476932 PAXBP1Q9Y5B6 917 aa24.31■■□□□ 1.48
LIMS2-214ENST00000476932 CUTAO60888 179 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 ATP6V1AP38606 617 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 ISM2Q6H9L7 571 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 METTL16Q86W50 562 aaKnown RBP24.3■■□□□ 1.48
LIMS2-214ENST00000476932 NOSTRINQ8IVI9 506 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 ZKSCAN3Q9BRR0 538 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 SCN7AQ01118 1682 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 SMC2O95347 1197 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 COL1A1P02452 1464 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-214ENST00000476932 MMP1P03956 469 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 TOB1P50616 345 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-214ENST00000476932 CHRNDQ07001 517 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 PNOCQ13519 176 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 CEP135Q66GS9 1140 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 ADGRA1Q86SQ6 560 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 CCAR2Q8N163 923 aaKnown RBP24.3■■□□□ 1.48
LIMS2-214ENST00000476932 MIGA1Q8NAN2 632 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 MYH2Q9UKX2 1941 aa24.3■■□□□ 1.48
LIMS2-214ENST00000476932 BAZ2AQ9UIF9 1905 aaKnown RBP24.29■■□□□ 1.48
LIMS2-214ENST00000476932 IGHMBP2P38935 993 aaKnown RBP24.29■■□□□ 1.48
LIMS2-214ENST00000476932 NCBP1Q09161 790 aaKnown RBP24.29■■□□□ 1.48
LIMS2-214ENST00000476932 RRP12Q5JTH9 1297 aaKnown RBP24.29■■□□□ 1.48
LIMS2-214ENST00000476932 ARMCX5Q6P1M9 558 aa24.29■■□□□ 1.48
LIMS2-214ENST00000476932 LOC102724428A0A0B4J2F2 783 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 SIK1P57059 783 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 RTN1Q16799 776 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 STK11IPQ8N1F8 1099 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 NACAP1Q9BZK3 213 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 BTBD18B2RXH4 712 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 TMC6Q7Z403 805 aa24.28■■□□□ 1.48
LIMS2-214ENST00000476932 NIP7Q9Y221 180 aaKnown RBP eCLIP24.28■■□□□ 1.48
LIMS2-214ENST00000476932 ZNF804BA4D1E1 1349 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 ATP1A3P13637 1013 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 LMOD1P29536 600 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-214ENST00000476932 WTAPQ15007 396 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 LONRF3Q496Y0 759 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 WASF1Q92558 559 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 ACSBG1Q96GR2 724 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 KCNJ14Q9UNX9 436 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 SYCP1Q15431 976 aa24.27■■□□□ 1.48
LIMS2-214ENST00000476932 KRBA2Q6ZNG9 492 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms