RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ENC1O14682 589 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 LIG1P18858 919 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 SSTR4P31391 388 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 ADMP35318 185 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 LDLRAD1Q5T700 205 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 DYMQ7RTS9 669 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 GIMAP7Q8NHV1 300 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 CEP44Q9C0F1 390 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 PCMTD2Q9NV79 361 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 PIM2Q9P1W9 311 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 AP4E1Q9UPM8 1137 aa8.23□□□□□ -1.09
PTCD3-211ENST00000476215 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 ASPAP45381 313 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 ST13P50502 369 aaKnown RBP8.22□□□□□ -1.09
PTCD3-211ENST00000476215 ID3Q02535 119 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 NFKBIBQ15653 356 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-211ENST00000476215 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 METTL22Q9BUU2 404 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-211ENST00000476215 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 C1GALT1Q9NS00 363 aa8.22□□□□□ -1.09
PTCD3-211ENST00000476215 NFICP08651 508 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 FOSL1P15407 271 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 BMP6P22004 513 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 MSMPQ1L6U9 139 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 SHISA5Q8N114 240 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 ATXN3LQ9H3M9 355 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 DISC1Q9NRI5 854 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 ATG3Q9NT62 314 aa8.21□□□□□ -1.1
PTCD3-211ENST00000476215 SCAMP3O14828 347 aaKnown RBP8.2□□□□□ -1.1
PTCD3-211ENST00000476215 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
PTCD3-211ENST00000476215 PRNPP04156 253 aa8.19□□□□□ -1.1
PTCD3-211ENST00000476215 CELA3AP09093 270 aa8.19□□□□□ -1.1
PTCD3-211ENST00000476215 RAB6AP20340 208 aa8.19□□□□□ -1.1
PTCD3-211ENST00000476215 SV2BQ7L1I2 683 aa8.19□□□□□ -1.1
PTCD3-211ENST00000476215 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
PTCD3-211ENST00000476215 DYNC1LI2O43237 492 aaPredicted RBP8.18□□□□□ -1.1
PTCD3-211ENST00000476215 PAGE1O75459 146 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 TRIM37O94972 964 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
PTCD3-211ENST00000476215 ZNF76P36508 570 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 ERVK-24P63145 666 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
PTCD3-211ENST00000476215 OSBPL1AQ9BXW6 950 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 ZC3H12CQ9C0D7 883 aaKnown RBP8.18□□□□□ -1.1
PTCD3-211ENST00000476215 SAMM50Q9Y512 469 aa8.18□□□□□ -1.1
PTCD3-211ENST00000476215 ADAMTS4O75173 837 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 TCF3P15923 654 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 FANCCQ00597 558 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 FBXL6Q8N531 539 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 KCNB2Q92953 911 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 RNF34Q969K3 372 aa8.17□□□□□ -1.1
PTCD3-211ENST00000476215 METTL5Q9NRN9 209 aaKnown RBP8.17□□□□□ -1.1
PTCD3-211ENST00000476215 FAM170BA6NMN3 283 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 RING1Q06587 406 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 RASIP1Q5U651 963 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 OGFOD3Q6PK18 319 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 GGT7Q9UJ14 662 aa8.16□□□□□ -1.1
PTCD3-211ENST00000476215 NEFMP07197 916 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 NTF4P34130 210 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 C9orf131Q5VYM1 1079 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-211ENST00000476215 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 SMYD4Q8IYR2 804 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-211ENST00000476215 PSMG3-AS1Q96PY0 264 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 CYP8B1Q9UNU6 501 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 DAGLAQ9Y4D2 1042 aa8.15□□□□□ -1.1
PTCD3-211ENST00000476215 F6X3S4 739 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 RLBP1P12271 317 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
PTCD3-211ENST00000476215 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 LRRC14Q15048 493 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 GRIN3AQ8TCU5 1115 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 PIDD1Q9HB75 910 aa8.14□□□□□ -1.11
PTCD3-211ENST00000476215 LIG3P49916 1009 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 LLGL2Q6P1M3 1020 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 ZNF765Q7L2R6 523 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 PCOLCE2Q9UKZ9 415 aa8.13□□□□□ -1.11
PTCD3-211ENST00000476215 CYP26A1O43174 497 aa8.12□□□□□ -1.11
PTCD3-211ENST00000476215 LMNB1P20700 586 aa8.12□□□□□ -1.11
PTCD3-211ENST00000476215 GBP2P32456 591 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-211ENST00000476215 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
PTCD3-211ENST00000476215 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
PTCD3-211ENST00000476215 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
PTCD3-211ENST00000476215 METTL16Q86W50 562 aaKnown RBP8.12□□□□□ -1.11
PTCD3-211ENST00000476215 ISL2Q96A47 359 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms