RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 MEIS3Q99687 375 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 BRCA2P51587 3418 aa13.42□□□□□ -0.26
CDRT1-205ENST00000475944 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-205ENST00000475944 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
CDRT1-205ENST00000475944 GNAI3P08754 354 aa13.42□□□□□ -0.26
CDRT1-205ENST00000475944 FCGRTP55899 365 aa13.42□□□□□ -0.26
CDRT1-205ENST00000475944 MVPQ14764 893 aaKnown RBP13.42□□□□□ -0.26
CDRT1-205ENST00000475944 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
CDRT1-205ENST00000475944 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-205ENST00000475944 FAM163AQ96GL9 167 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-205ENST00000475944 MROH7-TTC4A0A0A0MT08 1334 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 CTNND1O60716 968 aaKnown RBP13.41□□□□□ -0.26
CDRT1-205ENST00000475944 CYP2C8P10632 490 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 BCRP11274 1271 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 PTPRAP18433 802 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 BTDP43251 543 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 TIMM10P62072 90 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 UBXN2AP68543 259 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 MAP3K10Q02779 954 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 PICALMQ13492 652 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 MTFR1Q15390 333 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-205ENST00000475944 SLC45A1Q9Y2W3 748 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
CDRT1-205ENST00000475944 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
CDRT1-205ENST00000475944 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
CDRT1-205ENST00000475944 TFCP2Q12800 502 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 MTX1Q13505 466 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 SH3BP5LQ7L8J4 393 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 SLAIN1Q8ND83 568 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 DOCK1Q14185 1865 aa13.4□□□□□ -0.26
CDRT1-205ENST00000475944 GJB1P08034 283 aa13.39□□□□□ -0.27
CDRT1-205ENST00000475944 CCL5P13501 91 aa13.39□□□□□ -0.27
CDRT1-205ENST00000475944 GJA8P48165 433 aa13.39□□□□□ -0.27
CDRT1-205ENST00000475944 MECOMQ03112 1051 aa13.39□□□□□ -0.27
CDRT1-205ENST00000475944 PRKCZQ05513 592 aa13.39□□□□□ -0.27
CDRT1-205ENST00000475944 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
CDRT1-205ENST00000475944 DDX4Q9NQI0 724 aaKnown RBP13.39□□□□□ -0.27
CDRT1-205ENST00000475944 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
CDRT1-205ENST00000475944 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 TRIM75PA6NK02 468 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
CDRT1-205ENST00000475944 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-205ENST00000475944 LDHCP07864 332 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDRT1-205ENST00000475944 GSTO1P78417 241 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 GORABQ5T7V8 394 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 MGAMO43451 1857 aa13.38□□□□□ -0.27
CDRT1-205ENST00000475944 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-205ENST00000475944 H0YGN5 161 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
CDRT1-205ENST00000475944 TBC1D12O60347 775 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 RHBDL3P58872 404 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 DPF3Q92784 378 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-205ENST00000475944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDRT1-205ENST00000475944 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 PTPRFP10586 1907 aa13.37□□□□□ -0.27
CDRT1-205ENST00000475944 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
CDRT1-205ENST00000475944 ADCY3O60266 1144 aa13.36□□□□□ -0.27
CDRT1-205ENST00000475944 GNAI2P04899 355 aa13.36□□□□□ -0.27
CDRT1-205ENST00000475944 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-205ENST00000475944 FLT3LGP49771 235 aa13.36□□□□□ -0.27
CDRT1-205ENST00000475944 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
CDRT1-205ENST00000475944 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
CDRT1-205ENST00000475944 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
CDRT1-205ENST00000475944 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 CAPN2P17655 700 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 G3BP1Q13283 466 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDRT1-205ENST00000475944 IRF5Q13568 498 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-205ENST00000475944 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 ZNF384Q8TF68 577 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 U2AF1L4Q8WU68 220 aaKnown RBP13.35□□□□□ -0.27
CDRT1-205ENST00000475944 COA7Q96BR5 231 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
CDRT1-205ENST00000475944 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-205ENST00000475944 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 TRIM27P14373 513 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDRT1-205ENST00000475944 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
CDRT1-205ENST00000475944 PI16Q6UXB8 463 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms