RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 MEIS3P2A8K0S8 358 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 GSG1L2A8MUP6 293 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 GUCY2FP51841 1108 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 MCL1Q07820 350 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 LRRC41Q15345 812 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 EFHC2Q5JST6 749 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 SCARA3Q6AZY7 606 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 VHLLQ6RSH7 139 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 DHX32Q7L7V1 743 aaKnown RBP6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 SULF2Q8IWU5 870 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 TAB3Q8N5C8 712 aaPredicted RBP6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 GAL3ST3Q96A11 431 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 EPN3Q9H201 632 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 CLEC4MQ9H2X3 399 aaPredicted RBP6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 CBX8Q9HC52 389 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 LTBP3Q9NS15 1303 aa6.66□□□□□ -1.34
SRGAP3-205ENST00000475560 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 PLD2O14939 933 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 RASGRP1O95267 797 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 B3GALT4O96024 378 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 BMP2P12643 396 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 SMPD1P17405 629 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 L1CAMP32004 1257 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 NRLP54845 237 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 SIK1P57059 783 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 OS9Q13438 667 aaPredicted RBP6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 ZNF423Q2M1K9 1284 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 FOXB2Q5VYV0 432 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 INTS3Q68E01 1043 aaKnown RBP6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 UNC5AQ6ZN44 842 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 TRIM67Q6ZTA4 783 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 CYP4X1Q8N118 509 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 AFAP1L2Q8N4X5 818 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 TMEM40Q8WWA1 233 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 CLUHP3Q96NS8 147 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 RASSF4Q9H2L5 321 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 DYRK1BQ9Y463 629 aa6.65□□□□□ -1.34
SRGAP3-205ENST00000475560 PRR36Q9H6K5 1346 aa6.65□□□□□ -1.35
SRGAP3-205ENST00000475560 SHTN1A0MZ66 631 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 J3QW42 95 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 SUSD5O60279 629 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 RAPGEF3O95398 923 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 EYA4O95677 639 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 CCNFP41002 786 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PRR20EP86478 221 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PRR20CP86479 221 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PRR20DP86480 221 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PRR20BP86481 221 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PRR20AP86496 221 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 TNP2Q05952 138 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PCDH1Q08174 1060 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 ZNF252P-AS1Q0IIN9 211 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 LAMC2Q13753 1193 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC10A6Q3KNW5 377 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 FIGNL1Q6PIW4 674 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 DDX46Q7L014 1031 aaKnown RBP6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 APBB1IPQ7Z5R6 666 aaPredicted RBP6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 HPS1Q92902 700 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 SLC39A13Q96H72 371 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 DHRS4Q9BTZ2 278 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 NCOA5Q9HCD5 579 aaKnown RBP6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 PCDHGC4Q9Y5F7 938 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 COMMD10Q9Y6G5 202 aa6.64□□□□□ -1.35
SRGAP3-205ENST00000475560 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 PLIN1O60240 522 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 KATNA1O75449 491 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 KRT18P05783 430 aaKnown RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 CPEP16870 476 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 RAB27AP51159 221 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 HDAC1Q13547 482 aaPredicted RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 HLTFQ14527 1009 aaKnown RBP eCLIP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 ZYXQ15942 572 aaKnown RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 C6orf118Q5T5N4 469 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 KIAA1211LQ6NV74 962 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 STRA8Q7Z7C7 330 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 C14orf80Q86SX3 495 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 RIN3Q8TB24 985 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 BHMTQ93088 406 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 EVI5LQ96CN4 794 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 EXOC2Q96KP1 924 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 GAS2L1Q99501 681 aaPredicted RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 ASPSCR1Q9BZE9 553 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 UBA5Q9GZZ9 404 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 PHAXQ9H814 394 aaKnown RBP6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 TOR4AQ9NXH8 423 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 PCDHB10Q9UN67 800 aa6.63□□□□□ -1.35
SRGAP3-205ENST00000475560 PHLDB1Q86UU1 1377 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms