RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 RASAL3Q86YV0 1011 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 FAM227BQ96M60 508 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
RTN1-205ENST00000474911 LAMB1P07942 1786 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 A0A0D9SFI3 127 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 UBE2Q2LH0YL09 131 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
RTN1-205ENST00000474911 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
RTN1-205ENST00000474911 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
RTN1-205ENST00000474911 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 LDLRAD1Q5T700 205 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 COL13A1Q5TAT6 717 aaPredicted RBP16.15■□□□□ 0.18
RTN1-205ENST00000474911 FKBP1CQ5VVH2 108 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
RTN1-205ENST00000474911 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 HELLSQ9NRZ9 838 aa16.15■□□□□ 0.18
RTN1-205ENST00000474911 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.18
RTN1-205ENST00000474911 ZMYM1Q5SVZ6 1142 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
RTN1-205ENST00000474911 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 FAM83AQ86UY5 434 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 C22orf23Q9BZE7 217 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 IL25Q9H293 177 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 TMOD2Q9NZR1 351 aa16.14■□□□□ 0.17
RTN1-205ENST00000474911 ANGEL1Q9UNK9 670 aaKnown RBP16.14■□□□□ 0.17
RTN1-205ENST00000474911 TCP10L2B9ZVM9 353 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 IGSF3O75054 1194 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 HSPA8P11142 646 aaKnown RBP16.13■□□□□ 0.17
RTN1-205ENST00000474911 ADD2P35612 726 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
RTN1-205ENST00000474911 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
RTN1-205ENST00000474911 APPBP2Q92624 585 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 USP26Q9BXU7 913 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 DAGLAQ9Y4D2 1042 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 OTOFQ9HC10 1997 aa16.13■□□□□ 0.17
RTN1-205ENST00000474911 PDE6AP16499 860 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 LBX1P52954 281 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 PRKG1Q13976 671 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 DIXDC1Q155Q3 683 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 ABCF2Q9UG63 623 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
RTN1-205ENST00000474911 GAKO14976 1311 aa16.12■□□□□ 0.17
RTN1-205ENST00000474911 USP2O75604 605 aaPredicted RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 FAM163AQ96GL9 167 aaPredicted RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 TMEM39BQ9GZU3 492 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 CHGBP05060 677 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 CACNB3P54284 484 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 DZIP1Q86YF9 867 aaKnown RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
RTN1-205ENST00000474911 SAGE1Q9NXZ1 904 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
RTN1-205ENST00000474911 ZNF532Q9HCE3 1301 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 MCCP23508 829 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 CDC42EP5Q6NZY7 148 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
RTN1-205ENST00000474911 ANKRD13AQ8IZ07 590 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 MAGEB6Q8N7X4 407 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
RTN1-205ENST00000474911 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
RTN1-205ENST00000474911 CDAN1Q8IWY9 1227 aa16.09■□□□□ 0.17
RTN1-205ENST00000474911 FAM151AQ8WW52 585 aa16.09■□□□□ 0.17
RTN1-205ENST00000474911 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
RTN1-205ENST00000474911 M0R2C6 588 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
RTN1-205ENST00000474911 TM4SF4P48230 202 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 MECOMQ03112 1051 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 SPRYD7Q5W111 196 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 SLC10A4Q96EP9 437 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
RTN1-205ENST00000474911 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 CYP7A1P22680 504 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
RTN1-205ENST00000474911 GSTO1P78417 241 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 PTH1RQ03431 593 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
RTN1-205ENST00000474911 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
RTN1-205ENST00000474911 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
RTN1-205ENST00000474911 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
RTN1-205ENST00000474911 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms