RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
SCAF11-206ENST00000474828 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
SCAF11-206ENST00000474828 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
SCAF11-206ENST00000474828 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
SCAF11-206ENST00000474828 OSBPL5Q9H0X9 879 aaPredicted RBP20.47■□□□□ 0.87
SCAF11-206ENST00000474828 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
SCAF11-206ENST00000474828 MAGEB6P1A0A0J9YX57 407 aa20.46■□□□□ 0.87
SCAF11-206ENST00000474828 USP2O75604 605 aaPredicted RBP20.46■□□□□ 0.87
SCAF11-206ENST00000474828 LRRFIP1Q32MZ4 808 aaKnown RBP20.46■□□□□ 0.87
SCAF11-206ENST00000474828 APPBP2Q92624 585 aa20.46■□□□□ 0.87
SCAF11-206ENST00000474828 ZNF408Q9H9D4 720 aa20.46■□□□□ 0.87
SCAF11-206ENST00000474828 FLT1P17948 1338 aa20.46■□□□□ 0.87
SCAF11-206ENST00000474828 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
SCAF11-206ENST00000474828 PPP1R12BO60237 982 aaPredicted RBP20.45■□□□□ 0.86
SCAF11-206ENST00000474828 TBC1D12O60347 775 aa20.45■□□□□ 0.86
SCAF11-206ENST00000474828 TCP10Q12799 353 aa20.45■□□□□ 0.86
SCAF11-206ENST00000474828 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
SCAF11-206ENST00000474828 PUS7LQ9H0K6 701 aaKnown RBP20.45■□□□□ 0.86
SCAF11-206ENST00000474828 ZNF112Q9UJU3 913 aa20.45■□□□□ 0.86
SCAF11-206ENST00000474828 DDX60LQ5H9U9 1706 aaKnown RBP20.44■□□□□ 0.86
SCAF11-206ENST00000474828 HUNKP57058 714 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 DEFB115Q30KQ5 88 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 ZMYM1Q5SVZ6 1142 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 ARMC9Q7Z3E5 817 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 OSBP2Q969R2 916 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 DHX36Q9H2U1 1008 aaKnown RBP20.44■□□□□ 0.86
SCAF11-206ENST00000474828 PPP4R2Q9NY27 417 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 THSD7BQ9C0I4 1608 aa20.44■□□□□ 0.86
SCAF11-206ENST00000474828 COL13A1Q5TAT6 717 aaPredicted RBP20.43■□□□□ 0.86
SCAF11-206ENST00000474828 MOB2Q70IA6 237 aa20.43■□□□□ 0.86
SCAF11-206ENST00000474828 LCORLQ8N3X6 602 aa20.43■□□□□ 0.86
SCAF11-206ENST00000474828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCAF11-206ENST00000474828 TGFBRAP1Q8WUH2 860 aa20.43■□□□□ 0.86
SCAF11-206ENST00000474828 ABT1Q9ULW3 272 aaKnown RBP20.43■□□□□ 0.86
SCAF11-206ENST00000474828 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
SCAF11-206ENST00000474828 TTC22Q5TAA0 569 aa20.42■□□□□ 0.86
SCAF11-206ENST00000474828 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
SCAF11-206ENST00000474828 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
SCAF11-206ENST00000474828 CRNKL1Q9BZJ0 848 aaKnown RBP20.42■□□□□ 0.86
SCAF11-206ENST00000474828 TAOK2Q9UL54 1235 aa20.42■□□□□ 0.86
SCAF11-206ENST00000474828 PHF20L1A8MW92 1017 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 FAM155AB1AL88 458 aaPredicted RBP20.41■□□□□ 0.86
SCAF11-206ENST00000474828 UBE2Q2LH0YL09 131 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 MBD4O95243 580 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 PICALMQ13492 652 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 DCAF15Q66K64 600 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 RGMBQ6NW40 437 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 CSRNP1Q96S65 589 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
SCAF11-206ENST00000474828 SIPA1L1O43166 1804 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 IREB2P48200 963 aaKnown RBP20.4■□□□□ 0.86
SCAF11-206ENST00000474828 GIMAP6Q6P9H5 292 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.4■□□□□ 0.86
SCAF11-206ENST00000474828 MAPKAPK5Q8IW41 473 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 ANKRD13AQ8IZ07 590 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 ARMT1Q9H993 441 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 DCP1AQ9NPI6 582 aaPredicted RBP20.4■□□□□ 0.86
SCAF11-206ENST00000474828 PI4KBQ9UBF8 816 aa20.4■□□□□ 0.86
SCAF11-206ENST00000474828 ANGEL1Q9UNK9 670 aaKnown RBP20.4■□□□□ 0.86
SCAF11-206ENST00000474828 HSPA1AP0DMV8 641 aaKnown RBP20.39■□□□□ 0.85
SCAF11-206ENST00000474828 HSPA1BP0DMV9 641 aaKnown RBP20.39■□□□□ 0.85
SCAF11-206ENST00000474828 VEGFBP49765 207 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 FOXP4Q8IVH2 680 aaPredicted RBP20.39■□□□□ 0.85
SCAF11-206ENST00000474828 CCDC102AQ96A19 550 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 ZNF341Q9BYN7 854 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 EHD4Q9H223 541 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 HERC5Q9UII4 1024 aaKnown RBP20.39■□□□□ 0.85
SCAF11-206ENST00000474828 FZD1Q9UP38 647 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 OTOFQ9HC10 1997 aa20.39■□□□□ 0.85
SCAF11-206ENST00000474828 SLC10A3P09131 477 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 ECE1P42892 770 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 MAP3K9P80192 1104 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 NOL9Q5SY16 702 aaKnown RBP20.38■□□□□ 0.85
SCAF11-206ENST00000474828 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 CAPNS2Q96L46 248 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 LAMB1P07942 1786 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 PCNTO95613 3336 aa20.38■□□□□ 0.85
SCAF11-206ENST00000474828 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
SCAF11-206ENST00000474828 M0R2C6 588 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 GPAA1O43292 621 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 GNAT2P19087 354 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 USP5P45974 858 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 POTEDQ86YR6 584 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 RASAL3Q86YV0 1011 aa20.37■□□□□ 0.85
SCAF11-206ENST00000474828 SEC62Q99442 399 aaKnown RBP20.37■□□□□ 0.85
SCAF11-206ENST00000474828 GSG1L2A8MUP6 293 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 FOXP2O15409 715 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 PRKAB2O43741 272 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 SDSP20132 328 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 MAP2K2P36507 400 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 GABPAQ06546 454 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 TTLL12Q14166 644 aaPredicted RBP20.36■□□□□ 0.85
SCAF11-206ENST00000474828 CYP4F22Q6NT55 531 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 MIGA2Q7L4E1 593 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 ZSCAN29Q8IWY8 852 aaPredicted RBP20.36■□□□□ 0.85
SCAF11-206ENST00000474828 SDR42E1Q8WUS8 393 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms