RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
SEMA4D-216ENST00000474258 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
SEMA4D-216ENST00000474258 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 GNRH1P01148 92 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 LDHCP07864 332 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 GSTO1P78417 241 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 LACTBP83111 547 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 MAP3K10Q02779 954 aa13.63□□□□□ -0.23
SEMA4D-216ENST00000474258 CENPFP49454 3210 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 CDK5RAP2Q96SN8 1893 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 PDHXO00330 501 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 CXCL11O14625 94 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 PICALMQ13492 652 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 POLA2Q14181 598 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 C17orf99Q6UX52 265 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 SH3BP5LQ7L8J4 393 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 DDX4Q9NQI0 724 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 PTCH2Q9Y6C5 1203 aa13.62□□□□□ -0.23
SEMA4D-216ENST00000474258 DOCK3Q8IZD9 2030 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 HTTP42858 3142 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 SLC34A2O95436 690 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 PTPRAP18433 802 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 MCAMP43121 646 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 RHBDL3P58872 404 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 MOGSQ13724 837 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 PI16Q6UXB8 463 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 ZNF384Q8TF68 577 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 CPA4Q9UI42 421 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 ZHX2Q9Y6X8 837 aa13.61□□□□□ -0.23
SEMA4D-216ENST00000474258 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 TBC1D12O60347 775 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 CTNND1O60716 968 aaKnown RBP13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 PRMT2P55345 433 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 FASTKD5Q7L8L6 764 aaKnown RBP13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 ZNF333Q96JL9 665 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 LRP2BPQ9P2M1 347 aa13.6□□□□□ -0.23
SEMA4D-216ENST00000474258 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 HOXD10P28358 340 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 TTC39AQ5SRH9 613 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 GPAT2Q6NUI2 795 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 PARK7Q99497 189 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 AFG3L2Q9Y4W6 797 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
SEMA4D-216ENST00000474258 A0A0G2JLL6 359 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 ZBTB7BO15156 539 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 EN2P19622 333 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 PSMC4P43686 418 aa13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 SLC4A8Q2Y0W8 1093 aa13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 PRRT2Q7Z6L0 340 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA4D-216ENST00000474258 MYH1P12882 1939 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 COL2A1P02458 1487 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 BAG3O95817 575 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 SLURP2P0DP57 97 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 RLBP1P12271 317 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 GADL1Q6ZQY3 521 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 C1orf115Q9H7X2 142 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 SRRDQ9UH36 339 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 SLC45A1Q9Y2W3 748 aa13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-216ENST00000474258 IGSF3O75054 1194 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 CYP2C8P10632 490 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 BCRP11274 1271 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms