RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PANK2Q9BZ23 570 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 RASSF4Q9H2L5 321 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 HCN2Q9UL51 889 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 NUB1Q9Y5A7 615 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 MTUS2Q5JR59 1369 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 TET3O43151 1660 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 UBR1Q8IWV7 1749 aa8.71□□□□□ -1.01
GPNMB-209ENST00000474157 CDC14CA4D256 554 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 POTECB2RU33 542 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 EIF1AYO14602 144 aaKnown RBP8.71□□□□□ -1.02
GPNMB-209ENST00000474157 EGFRP00533 1210 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 CAPN2P17655 700 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 LAMC2Q13753 1193 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 GRIN2CQ14957 1233 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 CT47A1Q5JQC4 288 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-209ENST00000474157 RINLQ6ZS11 566 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 EXOC8Q8IYI6 725 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 ZNF526Q8TF50 670 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-209ENST00000474157 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.02
GPNMB-209ENST00000474157 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 TBX22Q9Y458 520 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 PAXBP1Q9Y5B6 917 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 PNPLA6Q8IY17 1366 aa8.71□□□□□ -1.02
GPNMB-209ENST00000474157 CCDC141Q6ZP82 1450 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 LRP5O75197 1615 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 PRPF40AO75400 957 aaKnown RBP8.7□□□□□ -1.02
GPNMB-209ENST00000474157 IPO7O95373 1038 aaKnown RBP8.7□□□□□ -1.02
GPNMB-209ENST00000474157 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 CD33P20138 364 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 GSCP56915 257 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-209ENST00000474157 KRT25Q7Z3Z0 450 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 JMYQ8N9B5 988 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-209ENST00000474157 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-209ENST00000474157 ZKSCAN5Q9Y2L8 839 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 ARHGAP31Q2M1Z3 1444 aa8.7□□□□□ -1.02
GPNMB-209ENST00000474157 DIP2AQ14689 1571 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 GPR25O00155 361 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 CPNE3O75131 537 aaKnown RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 PHACTR2O75167 634 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 EIF3JO75822 258 aaKnown RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 SASH3O75995 380 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 CCINQ13939 588 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 TERF2Q15554 542 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 LRCH2Q5VUJ6 765 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 VWA5B2Q8N398 1253 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 DNAJC25Q9H1X3 360 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 DEF6Q9H4E7 631 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 DIAPH3Q9NSV4 1193 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
GPNMB-209ENST00000474157 PHF24Q9UPV7 400 aa8.69□□□□□ -1.02
GPNMB-209ENST00000474157 MPHOSPH10O00566 681 aaKnown RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 TARSP26639 723 aaKnown RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 MUM1L1Q5H9M0 696 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 DDX17Q92841 729 aaKnown RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 CFHR5Q9BXR6 569 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 ANTXR1Q9H6X2 564 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 SUDS3Q9H7L9 328 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 CHMP5Q9NZZ3 219 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 MORC2Q9Y6X9 1032 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 ATRNO75882 1429 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 CAMSAP2Q08AD1 1489 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 EFCAB6Q5THR3 1501 aa8.68□□□□□ -1.02
GPNMB-209ENST00000474157 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
GPNMB-209ENST00000474157 COQ9O75208 318 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 REC8O95072 547 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 FGFR3P22607 806 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 BAG6P46379 1132 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 RABEP1Q15276 862 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 ALG1LQ6GMV1 187 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-209ENST00000474157 SGSM3Q96HU1 749 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 PDLIM2Q96JY6 352 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 TRERF1Q96PN7 1200 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 SLC30A3Q99726 388 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 CWC15Q9P013 229 aaKnown RBP8.67□□□□□ -1.02
GPNMB-209ENST00000474157 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 PLEKHG1Q9ULL1 1385 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 EP400Q96L91 3159 aa8.67□□□□□ -1.02
GPNMB-209ENST00000474157 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms