RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 HTTP42858 3142 aa30.64■■■□□ 2.49
PKD1-211ENST00000474088 DDTLA6NHG4 134 aaPredicted RBP30.63■■■□□ 2.49
PKD1-211ENST00000474088 MECOMQ03112 1051 aa30.63■■■□□ 2.49
PKD1-211ENST00000474088 SCYL3Q8IZE3 742 aa30.63■■■□□ 2.49
PKD1-211ENST00000474088 DDX4Q9NQI0 724 aaKnown RBP30.63■■■□□ 2.49
PKD1-211ENST00000474088 HMG20BQ9P0W2 317 aa30.63■■■□□ 2.49
PKD1-211ENST00000474088 MROH7-TTC4A0A0A0MT08 1334 aa30.63■■■□□ 2.49
PKD1-211ENST00000474088 GPR75-ASB3A0A0A6YYF3 556 aa30.62■■■□□ 2.49
PKD1-211ENST00000474088 PNMA6EA0A0J9YXQ4 647 aa30.62■■■□□ 2.49
PKD1-211ENST00000474088 PRMT2P55345 433 aa30.62■■■□□ 2.49
PKD1-211ENST00000474088 ZHX2Q9Y6X8 837 aa30.62■■■□□ 2.49
PKD1-211ENST00000474088 G3BP1Q13283 466 aaKnown RBP eCLIP30.61■■■□□ 2.49
PKD1-211ENST00000474088 PICALMQ13492 652 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 GORABQ5T7V8 394 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 SPATA5Q8NB90 893 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 PICK1Q9NRD5 415 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 ADGRA2Q96PE1 1338 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 ZSWIM8A7E2V4 1837 aa30.61■■■□□ 2.49
PKD1-211ENST00000474088 ECM2O94769 699 aaPredicted RBP30.6■■■□□ 2.49
PKD1-211ENST00000474088 PTPRAP18433 802 aa30.6■■■□□ 2.49
PKD1-211ENST00000474088 CTGFP29279 349 aa30.6■■■□□ 2.49
PKD1-211ENST00000474088 GPAT2Q6NUI2 795 aa30.6■■■□□ 2.49
PKD1-211ENST00000474088 ZNF384Q8TF68 577 aa30.6■■■□□ 2.49
PKD1-211ENST00000474088 DOCK2Q92608 1830 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 PSMC4P43686 418 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 RHBDL3P58872 404 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 SLC4A8Q2Y0W8 1093 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 PI16Q6UXB8 463 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 SH3TC2Q8TF17 1288 aa30.59■■■□□ 2.49
PKD1-211ENST00000474088 LDHCP07864 332 aa30.58■■■□□ 2.49
PKD1-211ENST00000474088 SLURP2P0DP57 97 aa30.58■■■□□ 2.49
PKD1-211ENST00000474088 ARID4AP29374 1257 aaPredicted RBP30.58■■■□□ 2.49
PKD1-211ENST00000474088 TBC1D9Q6ZT07 1266 aa30.58■■■□□ 2.49
PKD1-211ENST00000474088 PARK7Q99497 189 aaKnown RBP30.58■■■□□ 2.49
PKD1-211ENST00000474088 AFG3L2Q9Y4W6 797 aa30.58■■■□□ 2.49
PKD1-211ENST00000474088 CTNND1O60716 968 aaKnown RBP30.57■■■□□ 2.48
PKD1-211ENST00000474088 NPM3O75607 178 aaKnown RBP30.57■■■□□ 2.48
PKD1-211ENST00000474088 GSTO1P78417 241 aa30.57■■■□□ 2.48
PKD1-211ENST00000474088 FASTKD5Q7L8L6 764 aaKnown RBP30.57■■■□□ 2.48
PKD1-211ENST00000474088 TMEM57Q8N5G2 664 aa30.57■■■□□ 2.48
PKD1-211ENST00000474088 NSUN4Q96CB9 384 aaKnown RBP30.57■■■□□ 2.48
PKD1-211ENST00000474088 TRIM47Q96LD4 638 aa30.57■■■□□ 2.48
PKD1-211ENST00000474088 A0A0G2JLL6 359 aaPredicted RBP30.56■■■□□ 2.48
PKD1-211ENST00000474088 MYCP01106 439 aaPredicted RBP30.56■■■□□ 2.48
PKD1-211ENST00000474088 HOXD10P28358 340 aa30.56■■■□□ 2.48
PKD1-211ENST00000474088 ZKSCAN2Q63HK3 967 aa30.56■■■□□ 2.48
PKD1-211ENST00000474088 PRRT2Q7Z6L0 340 aaPredicted RBP30.56■■■□□ 2.48
PKD1-211ENST00000474088 SRRDQ9UH36 339 aa30.56■■■□□ 2.48
PKD1-211ENST00000474088 FMNL1O95466 1100 aaPredicted RBP30.55■■■□□ 2.48
PKD1-211ENST00000474088 MAP4K4O95819 1239 aaPredicted RBP30.55■■■□□ 2.48
PKD1-211ENST00000474088 CYP2C8P10632 490 aa30.55■■■□□ 2.48
PKD1-211ENST00000474088 TBC1D12O60347 775 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 UQCRFS1P1P0C7P4 283 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 BCRP11274 1271 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 OSBPP22059 807 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 MCAMP43121 646 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 RAI14Q9P0K7 980 aa30.54■■■□□ 2.48
PKD1-211ENST00000474088 GCC1Q96CN9 775 aa30.53■■■□□ 2.48
PKD1-211ENST00000474088 POLA2Q14181 598 aa30.52■■■□□ 2.48
PKD1-211ENST00000474088 GADL1Q6ZQY3 521 aa30.52■■■□□ 2.48
PKD1-211ENST00000474088 GPR108Q9NPR9 543 aa30.51■■■□□ 2.47
PKD1-211ENST00000474088 LRP2BPQ9P2M1 347 aa30.51■■■□□ 2.47
PKD1-211ENST00000474088 SLC45A1Q9Y2W3 748 aa30.51■■■□□ 2.47
PKD1-211ENST00000474088 KIAA0100Q14667 2235 aaKnown RBP30.51■■■□□ 2.47
PKD1-211ENST00000474088 ATP8B2P98198 1209 aa30.5■■■□□ 2.47
PKD1-211ENST00000474088 RAET1EQ8TD07 263 aa30.5■■■□□ 2.47
PKD1-211ENST00000474088 SSH3Q8TE77 659 aa30.5■■■□□ 2.47
PKD1-211ENST00000474088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.5■■■□□ 2.47
PKD1-211ENST00000474088 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.5■■■□□ 2.47
PKD1-211ENST00000474088 MYPNQ86TC9 1320 aa30.49■■■□□ 2.47
PKD1-211ENST00000474088 CENPFP49454 3210 aa30.49■■■□□ 2.47
PKD1-211ENST00000474088 OSBPL5Q9H0X9 879 aaPredicted RBP30.49■■■□□ 2.47
PKD1-211ENST00000474088 TRIM75PA6NK02 468 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 GRK4P32298 578 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 FCGRTP55899 365 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 TNNI3KQ59H18 835 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 CCDC84Q86UT8 332 aaPredicted RBP30.48■■■□□ 2.47
PKD1-211ENST00000474088 PCDH10Q9P2E7 1040 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 FPGT-TNNI3KV9GXZ4 949 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 DOCK1Q14185 1865 aa30.48■■■□□ 2.47
PKD1-211ENST00000474088 FAM196BA6NMK8 535 aa30.47■■■□□ 2.47
PKD1-211ENST00000474088 MTFR1Q15390 333 aa30.47■■■□□ 2.47
PKD1-211ENST00000474088 COL2A1P02458 1487 aaPredicted RBP30.46■■■□□ 2.47
PKD1-211ENST00000474088 OS9Q13438 667 aaPredicted RBP30.46■■■□□ 2.47
PKD1-211ENST00000474088 CCDC158Q5M9N0 1113 aa30.46■■■□□ 2.47
PKD1-211ENST00000474088 TTC39AQ5SRH9 613 aa30.46■■■□□ 2.47
PKD1-211ENST00000474088 TEX11Q8IYF3 940 aa30.46■■■□□ 2.47
PKD1-211ENST00000474088 DBNDD2Q9BQY9 259 aa30.46■■■□□ 2.47
PKD1-211ENST00000474088 SNRKQ9NRH2 765 aa30.46■■■□□ 2.47
PKD1-211ENST00000474088 SURF6O75683 361 aaKnown RBP30.45■■■□□ 2.47
PKD1-211ENST00000474088 HNRNPUQ00839 825 aaKnown RBP eCLIP30.45■■■□□ 2.47
PKD1-211ENST00000474088 PRKCZQ05513 592 aa30.45■■■□□ 2.47
PKD1-211ENST00000474088 NOL10Q9BSC4 688 aaKnown RBP30.45■■■□□ 2.47
PKD1-211ENST00000474088 PHIPQ8WWQ0 1821 aa30.45■■■□□ 2.46
PKD1-211ENST00000474088 NAA16Q6N069 864 aaPredicted RBP30.44■■■□□ 2.46
PKD1-211ENST00000474088 SH3RF3Q8TEJ3 882 aaPredicted RBP30.44■■■□□ 2.46
PKD1-211ENST00000474088 C1orf115Q9H7X2 142 aa30.44■■■□□ 2.46
PKD1-211ENST00000474088 AGTPBP1Q9UPW5 1226 aa30.44■■■□□ 2.46
PKD1-211ENST00000474088 SMCR8Q8TEV9 937 aaPredicted RBP30.43■■■□□ 2.46
PKD1-211ENST00000474088 GABRQQ9UN88 632 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms