RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 CXCL11O14625 94 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 TIMM10P62072 90 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 TFCP2Q12800 502 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
COPS7B-219ENST00000474042 GPAT2Q6NUI2 795 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 DDX4Q9NQI0 724 aaKnown RBP16.59■□□□□ 0.25
COPS7B-219ENST00000474042 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
COPS7B-219ENST00000474042 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.24
COPS7B-219ENST00000474042 TRIM27P14373 513 aa16.58■□□□□ 0.24
COPS7B-219ENST00000474042 BTDP43251 543 aa16.58■□□□□ 0.24
COPS7B-219ENST00000474042 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
COPS7B-219ENST00000474042 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.24
COPS7B-219ENST00000474042 SLF2Q8IX21 1173 aa16.58■□□□□ 0.24
COPS7B-219ENST00000474042 PARK7Q99497 189 aaKnown RBP16.58■□□□□ 0.24
COPS7B-219ENST00000474042 ABCF2Q9UG63 623 aa16.58■□□□□ 0.24
COPS7B-219ENST00000474042 SRRDQ9UH36 339 aa16.58■□□□□ 0.24
COPS7B-219ENST00000474042 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
COPS7B-219ENST00000474042 SIPA1L1O43166 1804 aa16.57■□□□□ 0.24
COPS7B-219ENST00000474042 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-219ENST00000474042 BCRP11274 1271 aa16.57■□□□□ 0.24
COPS7B-219ENST00000474042 RHBDL3P58872 404 aa16.57■□□□□ 0.24
COPS7B-219ENST00000474042 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
COPS7B-219ENST00000474042 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 GPR75-ASB3A0A0A6YYF3 556 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
COPS7B-219ENST00000474042 PTPRAP18433 802 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 OSBPP22059 807 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 PSMC4P43686 418 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 MECOMQ03112 1051 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 HMG20BQ9P0W2 317 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
COPS7B-219ENST00000474042 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
COPS7B-219ENST00000474042 PICALMQ13492 652 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
COPS7B-219ENST00000474042 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
COPS7B-219ENST00000474042 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
COPS7B-219ENST00000474042 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
COPS7B-219ENST00000474042 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
COPS7B-219ENST00000474042 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
COPS7B-219ENST00000474042 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
COPS7B-219ENST00000474042 GNAI2P04899 355 aa16.54■□□□□ 0.24
COPS7B-219ENST00000474042 CYP2C8P10632 490 aa16.54■□□□□ 0.24
COPS7B-219ENST00000474042 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
COPS7B-219ENST00000474042 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
COPS7B-219ENST00000474042 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
COPS7B-219ENST00000474042 NSUN4Q96CB9 384 aaKnown RBP16.54■□□□□ 0.24
COPS7B-219ENST00000474042 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
COPS7B-219ENST00000474042 TBC1D12O60347 775 aa16.53■□□□□ 0.24
COPS7B-219ENST00000474042 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-219ENST00000474042 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-219ENST00000474042 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-219ENST00000474042 HOXD10P28358 340 aa16.53■□□□□ 0.24
COPS7B-219ENST00000474042 MTFR1Q15390 333 aa16.53■□□□□ 0.24
COPS7B-219ENST00000474042 NEUROD6Q96NK8 337 aa16.53■□□□□ 0.24
COPS7B-219ENST00000474042 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-219ENST00000474042 BCAR3O75815 825 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 GRK4P32298 578 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 MCAMP43121 646 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 FCGRTP55899 365 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 GSTO1P78417 241 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 PRKCZQ05513 592 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 RAET1EQ8TD07 263 aa16.52■□□□□ 0.24
COPS7B-219ENST00000474042 LDHCP07864 332 aa16.51■□□□□ 0.23
COPS7B-219ENST00000474042 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
COPS7B-219ENST00000474042 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
COPS7B-219ENST00000474042 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
COPS7B-219ENST00000474042 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
COPS7B-219ENST00000474042 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 POLA2Q14181 598 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 FRAT1Q92837 279 aaPredicted RBP16.5■□□□□ 0.23
COPS7B-219ENST00000474042 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 DOCK3Q8IZD9 2030 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 CEP290O15078 2479 aa16.5■□□□□ 0.23
COPS7B-219ENST00000474042 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
COPS7B-219ENST00000474042 CCL5P13501 91 aa16.49■□□□□ 0.23
COPS7B-219ENST00000474042 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
COPS7B-219ENST00000474042 UBE2Q1Q7Z7E8 422 aa16.49■□□□□ 0.23
COPS7B-219ENST00000474042 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
COPS7B-219ENST00000474042 GABRQQ9UN88 632 aa16.49■□□□□ 0.23
COPS7B-219ENST00000474042 GJB1P08034 283 aa16.48■□□□□ 0.23
COPS7B-219ENST00000474042 GJA8P48165 433 aa16.48■□□□□ 0.23
COPS7B-219ENST00000474042 TREML2Q5T2D2 321 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms