RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 ME3Q16798 604 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 TBC1D10CQ8IV04 446 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 ZNF274Q96GC6 653 aaPredicted RBP11.93□□□□□ -0.5
APTX-217ENST00000473221 TMEM87BQ96K49 555 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 DCP1AQ9NPI6 582 aaPredicted RBP11.93□□□□□ -0.5
APTX-217ENST00000473221 TPCN1Q9ULQ1 816 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 NAV1Q8NEY1 1877 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
APTX-217ENST00000473221 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
APTX-217ENST00000473221 BTDP43251 543 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 AOC3Q16853 763 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
APTX-217ENST00000473221 AMOTL1Q8IY63 956 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
APTX-217ENST00000473221 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
APTX-217ENST00000473221 TTF2Q9UNY4 1162 aaKnown RBP11.92□□□□□ -0.5
APTX-217ENST00000473221 PCNTO95613 3336 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 USP17L21D6R901 530 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 PRC1O43663 620 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 USP5P45974 858 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 RHBDL3P58872 404 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
APTX-217ENST00000473221 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
APTX-217ENST00000473221 BRF1Q92994 677 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 TEKT1Q969V4 418 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
APTX-217ENST00000473221 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 MYH1P12882 1939 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 PFKFB2O60825 505 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 LIFRP42702 1097 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 ANTXR2P58335 489 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 LLPHQ9BRT6 129 aaKnown RBP11.9□□□□□ -0.5
APTX-217ENST00000473221 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 DAGLAQ9Y4D2 1042 aa11.9□□□□□ -0.5
APTX-217ENST00000473221 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 B4E1Z4 1266 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 ORC4O43929 436 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 TOMM70O94826 608 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 LARGE1O95461 756 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 CRKP46108 304 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 MMP14P50281 582 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 PRELPP51888 382 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 PDE4BQ07343 736 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 SART3Q15020 963 aaKnown RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 SGMS1Q86VZ5 419 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 TGFBRAP1Q8WUH2 860 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 ESR2Q92731 530 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 TAOK3Q9H2K8 898 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 TAOK2Q9UL54 1235 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 ANGEL1Q9UNK9 670 aaKnown RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 ROBO3Q96MS0 1386 aa11.89□□□□□ -0.51
APTX-217ENST00000473221 DDX60LQ5H9U9 1706 aaKnown RBP11.89□□□□□ -0.51
APTX-217ENST00000473221 NEDD4P46934 1319 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 KDM4AO75164 1064 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
APTX-217ENST00000473221 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
APTX-217ENST00000473221 CYB5R4Q7L1T6 521 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 CHST3Q7LGC8 479 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 IGDCC4Q8TDY8 1250 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 ZNF287Q9HBT7 754 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
APTX-217ENST00000473221 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
APTX-217ENST00000473221 ERICH2A1L162 156 aa11.87□□□□□ -0.51
APTX-217ENST00000473221 F8W031 263 aaPredicted RBP11.87□□□□□ -0.51
APTX-217ENST00000473221 DHX16O60231 1041 aaKnown RBP11.87□□□□□ -0.51
APTX-217ENST00000473221 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
APTX-217ENST00000473221 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms