RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 GPRC5DQ9NZD1 345 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 HACL1Q9UJ83 578 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 MYO3BQ8WXR4 1341 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 TRPM7Q96QT4 1865 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
SMC4-214ENST00000472991 EPS15P42566 896 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 CCDC158Q5M9N0 1113 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 GMLQ99445 158 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 IL21Q9HBE4 155 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
SMC4-214ENST00000472991 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
SMC4-214ENST00000472991 EPHX2P34913 555 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 MCAMP43121 646 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
SMC4-214ENST00000472991 SCARF1Q14162 830 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
SMC4-214ENST00000472991 DPF2Q92785 391 aa11.12□□□□□ -0.63
SMC4-214ENST00000472991 TAF1DQ9H5J8 278 aaPredicted RBP11.12□□□□□ -0.63
SMC4-214ENST00000472991 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
SMC4-214ENST00000472991 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
SMC4-214ENST00000472991 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
SMC4-214ENST00000472991 DNAJB2P25686 324 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 GRIK5Q16478 980 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 SPATA5Q8NB90 893 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 WDR66Q8TBY9 1149 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
SMC4-214ENST00000472991 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
SMC4-214ENST00000472991 H7C1D1 291 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 EGFRP00533 1210 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
SMC4-214ENST00000472991 EAPPQ56P03 285 aaPredicted RBP11.1□□□□□ -0.63
SMC4-214ENST00000472991 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SMC4-214ENST00000472991 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
SMC4-214ENST00000472991 TMEM134Q9H6X4 195 aa11.1□□□□□ -0.63
SMC4-214ENST00000472991 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
SMC4-214ENST00000472991 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 PRDX5P30044 214 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 ZAP70P43403 619 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SMC4-214ENST00000472991 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
SMC4-214ENST00000472991 C16orf71Q8IYS4 520 aaPredicted RBP11.09□□□□□ -0.63
SMC4-214ENST00000472991 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 MYOZ2Q9NPC6 264 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
SMC4-214ENST00000472991 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
SMC4-214ENST00000472991 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
SMC4-214ENST00000472991 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
SMC4-214ENST00000472991 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
SMC4-214ENST00000472991 GPATCH3Q96I76 525 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 MAST3O60307 1309 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
SMC4-214ENST00000472991 RCCD1A6NED2 376 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
SMC4-214ENST00000472991 HIRAP54198 1017 aaPredicted RBP11.07□□□□□ -0.64
SMC4-214ENST00000472991 NUCB1Q02818 461 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 PNMA8AQ86V59 439 aaPredicted RBP11.07□□□□□ -0.64
SMC4-214ENST00000472991 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMC4-214ENST00000472991 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
SMC4-214ENST00000472991 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 SUGT1Q9Y2Z0 365 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 MYH1P12882 1939 aa11.07□□□□□ -0.64
SMC4-214ENST00000472991 NAV1Q8NEY1 1877 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 ATP5JP18859 108 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 MX1P20591 662 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 CRKP46108 304 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 MMP14P50281 582 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 RBM5P52756 815 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMC4-214ENST00000472991 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
SMC4-214ENST00000472991 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 DZIP1Q86YF9 867 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms