RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 SEMA3EO15041 775 aa23.48■■□□□ 1.35
RHBDF1-207ENST00000472390 OSBPP22059 807 aa23.48■■□□□ 1.35
RHBDF1-207ENST00000472390 TBC1D9Q6ZT07 1266 aa23.48■■□□□ 1.35
RHBDF1-207ENST00000472390 SHISA4Q96DD7 197 aa23.48■■□□□ 1.35
RHBDF1-207ENST00000472390 CT47B1P0C2W7 299 aaPredicted RBP23.47■■□□□ 1.35
RHBDF1-207ENST00000472390 ZSCAN29Q8IWY8 852 aaPredicted RBP23.47■■□□□ 1.35
RHBDF1-207ENST00000472390 IDI2Q9BXS1 227 aa23.47■■□□□ 1.35
RHBDF1-207ENST00000472390 MROH7-TTC4A0A0A0MT08 1334 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 BCAR3O75815 825 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 MECOMQ03112 1051 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 ARHGEF6Q15052 776 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 HABP4Q5JVS0 413 aaKnown RBP23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 GADL1Q6ZQY3 521 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 SCYL3Q8IZE3 742 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 CLUAP1Q96AJ1 413 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 NEUROD6Q96NK8 337 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 ATAD5Q96QE3 1844 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 SRRDQ9UH36 339 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 ZHX2Q9Y6X8 837 aa23.46■■□□□ 1.35
RHBDF1-207ENST00000472390 PNMA6EA0A0J9YXQ4 647 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 ENTPD3O75355 529 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 TRIM27P14373 513 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 PTPRAP18433 802 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 RHBDL3P58872 404 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 NBPF11Q86T75 865 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 HMG20BQ9P0W2 317 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 MYO5AQ9Y4I1 1855 aaKnown RBP23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 SIPA1L1O43166 1804 aa23.45■■□□□ 1.34
RHBDF1-207ENST00000472390 MYPNQ86TC9 1320 aa23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 FMNL1O95466 1100 aaPredicted RBP23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 BCRP11274 1271 aa23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 PRKCZQ05513 592 aa23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 FRAT1Q92837 279 aaPredicted RBP23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 GABRQQ9UN88 632 aa23.44■■□□□ 1.34
RHBDF1-207ENST00000472390 A0A0G2JLL6 359 aaPredicted RBP23.43■■□□□ 1.34
RHBDF1-207ENST00000472390 MTX1Q13505 466 aa23.43■■□□□ 1.34
RHBDF1-207ENST00000472390 PRRT2Q7Z6L0 340 aaPredicted RBP23.43■■□□□ 1.34
RHBDF1-207ENST00000472390 TRIOBPQ9H2D6 2365 aa23.43■■□□□ 1.34
RHBDF1-207ENST00000472390 TRIM75PA6NK02 468 aa23.42■■□□□ 1.34
RHBDF1-207ENST00000472390 ZGPATQ8N5A5 531 aaKnown RBP23.42■■□□□ 1.34
RHBDF1-207ENST00000472390 PARK7Q99497 189 aaKnown RBP23.42■■□□□ 1.34
RHBDF1-207ENST00000472390 PICK1Q9NRD5 415 aa23.42■■□□□ 1.34
RHBDF1-207ENST00000472390 CDK5RAP2Q96SN8 1893 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 PDS5AQ29RF7 1337 aaKnown RBP23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 GNAI3P08754 354 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 RRP1BQ14684 758 aaKnown RBP23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 ERICH6Q7L0X2 663 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 RAET1EQ8TD07 263 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 AFG3L2Q9Y4W6 797 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 MAST2Q6P0Q8 1798 aa23.41■■□□□ 1.34
RHBDF1-207ENST00000472390 CXCL11O14625 94 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 GRK4P32298 578 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 MCAMP43121 646 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 SNRKQ9NRH2 765 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 DOCK3Q8IZD9 2030 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 LOC285556D6RIA3 1793 aa23.4■■□□□ 1.34
RHBDF1-207ENST00000472390 GPR75-ASB3A0A0A6YYF3 556 aa23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 TREML2Q5T2D2 321 aa23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 SPATA5Q8NB90 893 aa23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 NSUN4Q96CB9 384 aaKnown RBP23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 FAM163AQ96GL9 167 aaPredicted RBP23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.33
RHBDF1-207ENST00000472390 H0YGN5 161 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 CCL5P13501 91 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 MAP3K10Q02779 954 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 SPTY2D1Q68D10 685 aaPredicted RBP23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 RAI14Q9P0K7 980 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 COLQQ9Y215 455 aaPredicted RBP23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 AKAP2Q9Y2D5 859 aa23.38■■□□□ 1.33
RHBDF1-207ENST00000472390 ZBTB22O15209 634 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 GNRH1P01148 92 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 ELNP15502 786 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 ARID4AP29374 1257 aaPredicted RBP23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 SHROOM1Q2M3G4 852 aaPredicted RBP23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 GORABQ5T7V8 394 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 ATF7IPQ6VMQ6 1270 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 GCC1Q96CN9 775 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 PCDH10Q9P2E7 1040 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
RHBDF1-207ENST00000472390 CCER2I3L3R5 266 aa23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 GNAI2P04899 355 aa23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 PRMT2P55345 433 aa23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 FCGRTP55899 365 aa23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 SH3RF3Q8TEJ3 882 aaPredicted RBP23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 UNC93B1Q9H1C4 597 aa23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 BIN2Q9UBW5 565 aaPredicted RBP23.36■■□□□ 1.33
RHBDF1-207ENST00000472390 CTNND1O60716 968 aaKnown RBP23.35■■□□□ 1.33
RHBDF1-207ENST00000472390 FXR1P51114 621 aaKnown RBP eCLIP23.35■■□□□ 1.33
RHBDF1-207ENST00000472390 SLF2Q8IX21 1173 aa23.35■■□□□ 1.33
RHBDF1-207ENST00000472390 DBNDD2Q9BQY9 259 aa23.35■■□□□ 1.33
RHBDF1-207ENST00000472390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.35■■□□□ 1.332e-8■■■■■ 53.6
RHBDF1-207ENST00000472390 FASTKD5Q7L8L6 764 aaKnown RBP23.34■■□□□ 1.33
RHBDF1-207ENST00000472390 ADGRA1Q86SQ6 560 aa23.34■■□□□ 1.33
RHBDF1-207ENST00000472390 RNF208Q9H0X6 261 aa23.34■■□□□ 1.33
RHBDF1-207ENST00000472390 OSBPL5Q9H0X9 879 aaPredicted RBP23.34■■□□□ 1.33
RHBDF1-207ENST00000472390 PEX10O60683 326 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 HOXD10P28358 340 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms