RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DDX19BQ9UMR2 479 aa11.37□□□□□ -0.59
SMC4-213ENST00000472282 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
SMC4-213ENST00000472282 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
SMC4-213ENST00000472282 GNAI2P04899 355 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 PRKG1Q13976 671 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 UBE4AQ14139 1066 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 GRIK5Q16478 980 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 TATDN2Q93075 761 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
SMC4-213ENST00000472282 CSRNP1Q96S65 589 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 HDAC9Q9UKV0 1011 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
SMC4-213ENST00000472282 IQSEC3Q9UPP2 1182 aaPredicted RBP11.36□□□□□ -0.59
SMC4-213ENST00000472282 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 CLRN2A0PK11 232 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
SMC4-213ENST00000472282 DLGAP5Q15398 846 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 CFAP100Q494V2 611 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 RNF186Q9NXI6 227 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
SMC4-213ENST00000472282 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
SMC4-213ENST00000472282 SMAPO00193 183 aa11.34□□□□□ -0.59
SMC4-213ENST00000472282 CA12O43570 354 aa11.34□□□□□ -0.59
SMC4-213ENST00000472282 TRPA1O75762 1119 aa11.34□□□□□ -0.59
SMC4-213ENST00000472282 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
SMC4-213ENST00000472282 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
SMC4-213ENST00000472282 FKBP1BP68106 108 aa11.34□□□□□ -0.59
SMC4-213ENST00000472282 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
SMC4-213ENST00000472282 APOBEC3FQ8IUX4 373 aaKnown RBP11.34□□□□□ -0.59
SMC4-213ENST00000472282 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
SMC4-213ENST00000472282 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
SMC4-213ENST00000472282 PDE8BO95263 885 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 OSBPP22059 807 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 MMP14P50281 582 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
SMC4-213ENST00000472282 MTX1Q13505 466 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
SMC4-213ENST00000472282 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 FGFR2P21802 821 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 ATG9AQ7Z3C6 839 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 MCOLN1Q9GZU1 580 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
SMC4-213ENST00000472282 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 ANGEL1Q9UNK9 670 aaKnown RBP11.32□□□□□ -0.6
SMC4-213ENST00000472282 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
SMC4-213ENST00000472282 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
SMC4-213ENST00000472282 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
SMC4-213ENST00000472282 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 EYA2O00167 538 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 NF2P35240 595 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 RBM5P52756 815 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMC4-213ENST00000472282 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
SMC4-213ENST00000472282 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
SMC4-213ENST00000472282 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 CLMNQ96JQ2 1002 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 SIL1Q9H173 461 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
SMC4-213ENST00000472282 SAGE1Q9NXZ1 904 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
SMC4-213ENST00000472282 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
SMC4-213ENST00000472282 DGKZQ13574 1117 aa11.3□□□□□ -0.6
SMC4-213ENST00000472282 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
SMC4-213ENST00000472282 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
SMC4-213ENST00000472282 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
SMC4-213ENST00000472282 RNF40O75150 1001 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 CRKP46108 304 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
SMC4-213ENST00000472282 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 RASA3Q14644 834 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
SMC4-213ENST00000472282 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
SMC4-213ENST00000472282 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
SMC4-213ENST00000472282 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 MYO1BO43795 1136 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
SMC4-213ENST00000472282 CENPBP07199 599 aaPredicted RBP11.28□□□□□ -0.6
SMC4-213ENST00000472282 TM4SF4P48230 202 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 CACNB3P54284 484 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 SPRYD7Q5W111 196 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 TEPSINQ96N21 525 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 R3HDMLQ9H3Y0 253 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
SMC4-213ENST00000472282 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms