RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
CLRN1-205ENST00000472224 SMARCA5O60264 1052 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-205ENST00000472224 ZAP70P43403 619 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 HHIPL2Q6UWX4 724 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-205ENST00000472224 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 PPP2R3BQ9Y5P8 575 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 NDUFB9Q9Y6M9 179 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 DOCK2Q92608 1830 aa14.5□□□□□ -0.09
CLRN1-205ENST00000472224 OTOFQ9HC10 1997 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 SSC5DA1L4H1 1573 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 TNNI2P48788 182 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 IRX6P78412 446 aaPredicted RBP14.49□□□□□ -0.09
CLRN1-205ENST00000472224 RASA3Q14644 834 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 APOBEC3HQ6NTF7 200 aaKnown RBP14.49□□□□□ -0.09
CLRN1-205ENST00000472224 SLF2Q8IX21 1173 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 SLC17A8Q8NDX2 589 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 ZNF333Q96JL9 665 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 ZSWIM8A7E2V4 1837 aa14.49□□□□□ -0.09
CLRN1-205ENST00000472224 LAMA3Q16787 3333 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 MROH7-TTC4A0A0A0MT08 1334 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 MECOMQ03112 1051 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 CRHR2Q13324 411 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 ERO1AQ96HE7 468 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 MRIQ9BWK5 157 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 TMEM39BQ9GZU3 492 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 MYH7P12883 1935 aa14.48□□□□□ -0.09
CLRN1-205ENST00000472224 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 CYP2E1P05181 493 aaPredicted RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 BTDP43251 543 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 GSTO1P78417 241 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 NBPF12Q5TAG4 269 aaPredicted RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 CDC42EP5Q6NZY7 148 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 CDAN1Q8IWY9 1227 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 CLMNQ96JQ2 1002 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 DCTPP1Q9H773 170 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 PIH1D3Q9NQM4 214 aaKnown RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 USP40Q9NVE5 1235 aa14.47□□□□□ -0.09
CLRN1-205ENST00000472224 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 ANGEL1Q9UNK9 670 aaKnown RBP14.47□□□□□ -0.09
CLRN1-205ENST00000472224 CDK5RAP2Q96SN8 1893 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 GAKO14976 1311 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 IDH1O75874 414 aaKnown RBP14.46□□□□□ -0.09
CLRN1-205ENST00000472224 INHBEP58166 350 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 TCP10Q12799 353 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 SUPT20HL1Q3ZLR7 823 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
CLRN1-205ENST00000472224 NSUN4Q96CB9 384 aaKnown RBP14.46□□□□□ -0.09
CLRN1-205ENST00000472224 WNK4Q96J92 1243 aa14.46□□□□□ -0.09
CLRN1-205ENST00000472224 ZNF512BQ96KM6 892 aaPredicted RBP14.46□□□□□ -0.09
CLRN1-205ENST00000472224 NOL10Q9BSC4 688 aaKnown RBP14.46□□□□□ -0.09
CLRN1-205ENST00000472224 UNC80Q8N2C7 3258 aa14.45□□□□□ -0.1
CLRN1-205ENST00000472224 LDHCP07864 332 aa14.45□□□□□ -0.1
CLRN1-205ENST00000472224 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
CLRN1-205ENST00000472224 TMEM106CQ9BVX2 250 aa14.45□□□□□ -0.1
CLRN1-205ENST00000472224 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
CLRN1-205ENST00000472224 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
CLRN1-205ENST00000472224 ZBTB48P10074 688 aaPredicted RBP14.44□□□□□ -0.1
CLRN1-205ENST00000472224 GJA5P36382 358 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 NFIAQ12857 509 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 PICALMQ13492 652 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 PTPN18Q99952 460 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 BOLA2Q9H3K6 86 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 PTCH2Q9Y6C5 1203 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 CUL9Q8IWT3 2517 aa14.44□□□□□ -0.1
CLRN1-205ENST00000472224 FOCADQ5VW36 1801 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 GOLIM4O00461 696 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 RGS3P49796 1198 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 SP3Q02447 781 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 FKBP1CQ5VVH2 108 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 TSHZ3Q63HK5 1081 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 FAM83AQ86UY5 434 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 SLC10A4Q96EP9 437 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 TEPSINQ96N21 525 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
CLRN1-205ENST00000472224 RPAP1Q9BWH6 1393 aaPredicted RBP14.43□□□□□ -0.1
CLRN1-205ENST00000472224 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 MYCP01106 439 aaPredicted RBP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 CYP7A1P22680 504 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 MAP3K12Q12852 859 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 AAMPQ13685 434 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 SLC9C1Q4G0N8 1177 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 ZSCAN29Q8IWY8 852 aaPredicted RBP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 AATFQ9NY61 560 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLRN1-205ENST00000472224 FAM198AQ9UFP1 575 aa14.42□□□□□ -0.1
CLRN1-205ENST00000472224 MYH1P12882 1939 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 HDAC1Q13547 482 aaPredicted RBP14.41□□□□□ -0.1
CLRN1-205ENST00000472224 TTF1Q15361 905 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms