RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 LGR6Q9HBX8 967 aa5.94□□□□□ -1.46
LMNB1-205ENST00000472034 KCNQ5Q9NR82 932 aa5.94□□□□□ -1.46
LMNB1-205ENST00000472034 ZMYND8Q9ULU4 1186 aaPredicted RBP5.94□□□□□ -1.46
LMNB1-205ENST00000472034 KIF24Q5T7B8 1368 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 ALPK3Q96L96 1907 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 PSMD14O00487 310 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 AXIN1O15169 862 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 TRAK2O60296 914 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 CDK11BP21127 795 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 WDR4P57081 412 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 PTPN12Q05209 780 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 SREBF2Q12772 1141 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 EIF4A2Q14240 407 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 LRIT3Q3SXY7 679 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 INTS6LQ5JSJ4 861 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 HPS1Q92902 700 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 HTATIP2Q9BUP3 242 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 BCCIPQ9P287 314 aaKnown RBP eCLIP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 FZD1Q9UP38 647 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 ROCK2O75116 1388 aaKnown RBP5.93□□□□□ -1.46
LMNB1-205ENST00000472034 RAB3GAP2Q9H2M9 1393 aa5.93□□□□□ -1.46
LMNB1-205ENST00000472034 CACNA1GO43497 2377 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 ESPNB1AK53 854 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 CAPN5O15484 640 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-205ENST00000472034 UPP2O95045 317 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 AVPP01185 164 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 TNNT2P45379 298 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-205ENST00000472034 FGD1P98174 961 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 PRKG1Q13976 671 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 TNIP1Q15025 636 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 CRY2Q49AN0 593 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 PLEKHO1Q53GL0 409 aaPredicted RBP5.92□□□□□ -1.46
LMNB1-205ENST00000472034 HDGFL1Q5TGJ6 251 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 ANGEL2Q5VTE6 544 aaKnown RBP5.92□□□□□ -1.46
LMNB1-205ENST00000472034 CC2D2BQ6DHV5 1058 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 NBPF11Q86T75 865 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 RNF135Q8IUD6 432 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 SLC52A2Q9HAB3 445 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 WASHC2AQ641Q2 1341 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 BDP1A6H8Y1 2624 aa5.92□□□□□ -1.46
LMNB1-205ENST00000472034 NCOR1O75376 2440 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 ZIC2O95409 532 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-205ENST00000472034 STARD3NLO95772 234 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 SYN1P17600 705 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 BMP8BP34820 402 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 SMCPP49901 116 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-205ENST00000472034 FKBP1BP68106 108 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 SP3Q02447 781 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 C1orf141Q5JVX7 400 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 PPP1R26Q5T8A7 1209 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-205ENST00000472034 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 USP38Q8NB14 1042 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 CDX2Q99626 313 aaPredicted RBP5.91□□□□□ -1.46
LMNB1-205ENST00000472034 ARHGAP39Q9C0H5 1083 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 ALG2Q9H553 416 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 NIP7Q9Y221 180 aaKnown RBP eCLIP5.91□□□□□ -1.46
LMNB1-205ENST00000472034 RIC1Q4ADV7 1423 aa5.91□□□□□ -1.46
LMNB1-205ENST00000472034 UBR2Q8IWV8 1755 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 KIF20BQ96Q89 1820 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 ERVH48-1M5A8F1 160 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 NR3C2P08235 984 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 KIAA2012Q0VF49 1180 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 SCARF1Q14162 830 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 MAP7D1Q3KQU3 841 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 TPTE2Q6XPS3 522 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 TDHQ8IZJ6 230 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 CRIPAKQ8N1N5 446 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 MYLIPQ8WY64 445 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 DPF2Q92785 391 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 RTFDC1Q9BY42 306 aaPredicted RBP5.9□□□□□ -1.46
LMNB1-205ENST00000472034 DBNDD1Q9H9R9 158 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 PCDHB11Q9Y5F2 797 aa5.9□□□□□ -1.46
LMNB1-205ENST00000472034 RTL9Q8NET4 1388 aa5.9□□□□□ -1.47
LMNB1-205ENST00000472034 TAF1P21675 1872 aa5.9□□□□□ -1.47
LMNB1-205ENST00000472034 DUOX1Q9NRD9 1551 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 POM121CA8CG34 1229 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 LZTS3O60299 673 aaPredicted RBP5.89□□□□□ -1.47
LMNB1-205ENST00000472034 GJA8P48165 433 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 USP4Q13107 963 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 HLFQ16534 295 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 C7orf61Q8IZ16 206 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 GLMNQ92990 594 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 L3MBTL2Q969R5 705 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 ZNF496Q96IT1 587 aaPredicted RBP5.89□□□□□ -1.47
LMNB1-205ENST00000472034 CLMNQ96JQ2 1002 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 PTPN18Q99952 460 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 POLKQ9UBT6 870 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 XIRP2A4UGR9 3374 aa5.89□□□□□ -1.47
LMNB1-205ENST00000472034 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
LMNB1-205ENST00000472034 ZNF646O15015 1829 aaPredicted RBP5.88□□□□□ -1.47
LMNB1-205ENST00000472034 RNMTO43148 476 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms