RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ZNF341Q9BYN7 854 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYN3-211ENST00000472027 CSADQ9Y600 493 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 AKAP11Q9UKA4 1901 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
SYN3-211ENST00000472027 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
SYN3-211ENST00000472027 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
SYN3-211ENST00000472027 GJA5P36382 358 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 INHBEP58166 350 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 TEX11Q8IYF3 940 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
SYN3-211ENST00000472027 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
SYN3-211ENST00000472027 SAGE1Q9NXZ1 904 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 RFX7Q2KHR2 1363 aa11.14□□□□□ -0.63
SYN3-211ENST00000472027 GOLIM4O00461 696 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 PLCG2P16885 1265 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 DYNLL1P63167 89 aaKnown RBP11.13□□□□□ -0.63
SYN3-211ENST00000472027 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 AAMPQ13685 434 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
SYN3-211ENST00000472027 HAUS7Q99871 368 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 OSBPL5Q9H0X9 879 aaPredicted RBP11.13□□□□□ -0.63
SYN3-211ENST00000472027 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 PCNTO95613 3336 aa11.13□□□□□ -0.63
SYN3-211ENST00000472027 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 INPP5BP32019 993 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
SYN3-211ENST00000472027 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
SYN3-211ENST00000472027 MIGA1Q8NAN2 632 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
SYN3-211ENST00000472027 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
SYN3-211ENST00000472027 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 TBC1D12O60347 775 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 ATRNL1Q5VV63 1379 aa11.11□□□□□ -0.63
SYN3-211ENST00000472027 ZNF532Q9HCE3 1301 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 PDE6AP16499 860 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 GTF2A2P52657 109 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 PPATQ06203 517 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 NOL9Q5SY16 702 aaKnown RBP11.1□□□□□ -0.63
SYN3-211ENST00000472027 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 CERS3Q8IU89 383 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 GCC1Q96CN9 775 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 PTPN18Q99952 460 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
SYN3-211ENST00000472027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
SYN3-211ENST00000472027 PI4KBQ9UBF8 816 aa11.1□□□□□ -0.63
SYN3-211ENST00000472027 FLT1P17948 1338 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
SYN3-211ENST00000472027 IRF6O14896 467 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 ADD2P35612 726 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 USP5P45974 858 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 OTUD7BQ6GQQ9 843 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
SYN3-211ENST00000472027 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
SYN3-211ENST00000472027 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
SYN3-211ENST00000472027 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
SYN3-211ENST00000472027 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
SYN3-211ENST00000472027 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
SYN3-211ENST00000472027 IGHDP01880 384 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 PPIL2Q13356 520 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 CCL15Q16663 113 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
SYN3-211ENST00000472027 OTUD7AQ8TE49 926 aaPredicted RBP11.08□□□□□ -0.64
SYN3-211ENST00000472027 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 CFHR5Q9BXR6 569 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
SYN3-211ENST00000472027 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 SAP30BPQ9UHR5 308 aaKnown RBP11.08□□□□□ -0.64
SYN3-211ENST00000472027 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 TTC41PQ6P2S7 1318 aa11.08□□□□□ -0.64
SYN3-211ENST00000472027 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
SYN3-211ENST00000472027 OTOFQ9HC10 1997 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms