RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 PLEKHM2Q8IWE5 1019 aa21.44■■□□□ 1.02
VPS72-204ENST00000471423 CAPNS2Q96L46 248 aa21.44■■□□□ 1.02
VPS72-204ENST00000471423 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 MAGEB6P1A0A0J9YX57 407 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 USP2O75604 605 aaPredicted RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 ZNF157P51786 506 aaPredicted RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 MAP3K11Q16584 847 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 ZSCAN25Q6NSZ9 544 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 ZSCAN29Q8IWY8 852 aaPredicted RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 TGFBRAP1Q8WUH2 860 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 HOOK2Q96ED9 719 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 CSRNP1Q96S65 589 aa21.43■■□□□ 1.02
VPS72-204ENST00000471423 RIOK1Q9BRS2 568 aaKnown RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 OSBPL5Q9H0X9 879 aaPredicted RBP21.43■■□□□ 1.02
VPS72-204ENST00000471423 DDTLA6NHG4 134 aaPredicted RBP21.42■■□□□ 1.02
VPS72-204ENST00000471423 COL2A1P02458 1487 aaPredicted RBP21.42■■□□□ 1.02
VPS72-204ENST00000471423 FLT1P17948 1338 aa21.42■■□□□ 1.02
VPS72-204ENST00000471423 ECE1P42892 770 aa21.42■■□□□ 1.02
VPS72-204ENST00000471423 IREB2P48200 963 aaKnown RBP21.42■■□□□ 1.02
VPS72-204ENST00000471423 UBE3CQ15386 1083 aa21.42■■□□□ 1.02
VPS72-204ENST00000471423 MAPKAPK5Q8IW41 473 aa21.42■■□□□ 1.02
VPS72-204ENST00000471423 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
VPS72-204ENST00000471423 PCNTO95613 3336 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 THSD7BQ9C0I4 1608 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 ATRNL1Q5VV63 1379 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 PDE4AP27815 886 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 LDLRAD1Q5T700 205 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 MIGA2Q7L4E1 593 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 FSD1Q9BTV5 496 aa21.41■■□□□ 1.02
VPS72-204ENST00000471423 MBD4O95243 580 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 DCAF15Q66K64 600 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 RASAL3Q86YV0 1011 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 CLMNQ96JQ2 1002 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 OSBPL3Q9H4L5 887 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 ARMT1Q9H993 441 aa21.4■■□□□ 1.02
VPS72-204ENST00000471423 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.4■■□□□ 1.02
VPS72-204ENST00000471423 RNF113AO15541 343 aaKnown RBP21.39■■□□□ 1.01
VPS72-204ENST00000471423 AOC2O75106 756 aa21.39■■□□□ 1.01
VPS72-204ENST00000471423 SLC10A3P09131 477 aa21.39■■□□□ 1.01
VPS72-204ENST00000471423 USP5P45974 858 aa21.39■■□□□ 1.01
VPS72-204ENST00000471423 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.39■■□□□ 1.01
VPS72-204ENST00000471423 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 FAM155AB1AL88 458 aaPredicted RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 ZFYP08048 801 aaPredicted RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 ANKRD13AQ8IZ07 590 aa21.38■■□□□ 1.01
VPS72-204ENST00000471423 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
VPS72-204ENST00000471423 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
VPS72-204ENST00000471423 WRNIP1Q96S55 665 aa21.38■■□□□ 1.01
VPS72-204ENST00000471423 ZNF341Q9BYN7 854 aa21.38■■□□□ 1.01
VPS72-204ENST00000471423 CRNKL1Q9BZJ0 848 aaKnown RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 PUS7LQ9H0K6 701 aaKnown RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 SAP30BPQ9UHR5 308 aaKnown RBP21.38■■□□□ 1.01
VPS72-204ENST00000471423 NAV1Q8NEY1 1877 aa21.37■■□□□ 1.01
VPS72-204ENST00000471423 SLURP2P0DP57 97 aa21.37■■□□□ 1.01
VPS72-204ENST00000471423 LRRFIP1Q32MZ4 808 aaKnown RBP21.37■■□□□ 1.01
VPS72-204ENST00000471423 APPBP2Q92624 585 aa21.37■■□□□ 1.01
VPS72-204ENST00000471423 CCDC102AQ96A19 550 aa21.37■■□□□ 1.01
VPS72-204ENST00000471423 AIDAQ96BJ3 306 aa21.37■■□□□ 1.01
VPS72-204ENST00000471423 SIPA1L1O43166 1804 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 UNCXA6NJT0 531 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 NOGQ13253 232 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 VGLL4Q14135 290 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.36■■□□□ 1.01
VPS72-204ENST00000471423 SDR42E1Q8WUS8 393 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 OSBP2Q969R2 916 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 SLC10A4Q96EP9 437 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 PALD1Q9ULE6 856 aa21.36■■□□□ 1.01
VPS72-204ENST00000471423 MYH1P12882 1939 aa21.35■■□□□ 1.01
VPS72-204ENST00000471423 TRIM6-TRIM34B2RNG4 842 aa21.35■■□□□ 1.01
VPS72-204ENST00000471423 MAP3K9P80192 1104 aa21.35■■□□□ 1.01
VPS72-204ENST00000471423 ZIC5Q96T25 663 aa21.35■■□□□ 1.01
VPS72-204ENST00000471423 DHX36Q9H2U1 1008 aaKnown RBP21.35■■□□□ 1.01
VPS72-204ENST00000471423 ELP3Q9H9T3 547 aa21.35■■□□□ 1.01
VPS72-204ENST00000471423 FAM196BA6NMK8 535 aa21.34■■□□□ 1.01
VPS72-204ENST00000471423 PRKAB2O43741 272 aa21.34■■□□□ 1.01
VPS72-204ENST00000471423 INPP5BP32019 993 aa21.34■■□□□ 1.01
VPS72-204ENST00000471423 MKRN3Q13064 507 aaKnown RBP21.34■■□□□ 1.01
VPS72-204ENST00000471423 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
VPS72-204ENST00000471423 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
VPS72-204ENST00000471423 CSADQ9Y600 493 aa21.34■■□□□ 1.01
VPS72-204ENST00000471423 M0R2C6 588 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 MAP2K2P36507 400 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 MAP3K10Q02779 954 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
VPS72-204ENST00000471423 DCP1AQ9NPI6 582 aaPredicted RBP21.33■■□□□ 1.01
VPS72-204ENST00000471423 PI4KBQ9UBF8 816 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 ZNF112Q9UJU3 913 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 SNCAIPQ9Y6H5 919 aa21.33■■□□□ 1.01
VPS72-204ENST00000471423 HLA-DOAP06340 250 aa21.32■■□□□ 1
VPS72-204ENST00000471423 WNK4Q96J92 1243 aa21.32■■□□□ 1
VPS72-204ENST00000471423 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
VPS72-204ENST00000471423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms