RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 RBM8AQ9Y5S9 174 aaKnown RBP34.49■■■■□ 3.11
SOD1-203ENST00000470944 CNTNAP1P78357 1384 aa34.48■■■■□ 3.11
SOD1-203ENST00000470944 TDO2P48775 406 aa34.48■■■■□ 3.11
SOD1-203ENST00000470944 SLC4A8Q2Y0W8 1093 aa34.48■■■■□ 3.11
SOD1-203ENST00000470944 EAPPQ56P03 285 aaPredicted RBP34.48■■■■□ 3.11
SOD1-203ENST00000470944 NACAP1Q9BZK3 213 aa34.48■■■■□ 3.11
SOD1-203ENST00000470944 NAPBQ9H115 298 aa34.48■■■■□ 3.11
SOD1-203ENST00000470944 EVX2Q03828 476 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 ALX1Q15699 326 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 GIMAP6Q6P9H5 292 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 MCM9Q9NXL9 1143 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 SMIM22K7EJ46 135 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 POTEIP0CG38 1075 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 POTEJP0CG39 1038 aa34.47■■■■□ 3.11
SOD1-203ENST00000470944 OSBPL5Q9H0X9 879 aaPredicted RBP34.47■■■■□ 3.11
SOD1-203ENST00000470944 FOCADQ5VW36 1801 aa34.46■■■■□ 3.11
SOD1-203ENST00000470944 CYP2D7A0A087X1C5 515 aa34.46■■■■□ 3.11
SOD1-203ENST00000470944 FKBP1CQ5VVH2 108 aa34.46■■■■□ 3.11
SOD1-203ENST00000470944 CTR9Q6PD62 1173 aa34.46■■■■□ 3.11
SOD1-203ENST00000470944 PALD1Q9ULE6 856 aa34.46■■■■□ 3.11
SOD1-203ENST00000470944 USP17L12C9JPN9 530 aa34.45■■■■□ 3.11
SOD1-203ENST00000470944 USP17L21D6R901 530 aa34.45■■■■□ 3.11
SOD1-203ENST00000470944 NPM3O75607 178 aaKnown RBP34.44■■■■□ 3.1
SOD1-203ENST00000470944 CYP2D6P10635 497 aa34.44■■■■□ 3.1
SOD1-203ENST00000470944 PNMA8AQ86V59 439 aaPredicted RBP34.44■■■■□ 3.1
SOD1-203ENST00000470944 DDRGK1Q96HY6 314 aa34.44■■■■□ 3.1
SOD1-203ENST00000470944 U3KPZ7 1027 aaPredicted RBP34.44■■■■□ 3.1
SOD1-203ENST00000470944 ENTPD3O75355 529 aa34.44■■■■□ 3.1
SOD1-203ENST00000470944 SH3BP5LQ7L8J4 393 aa34.44■■■■□ 3.1
SOD1-203ENST00000470944 BAZ2AQ9UIF9 1905 aaKnown RBP34.44■■■■□ 3.1
SOD1-203ENST00000470944 DDX60LQ5H9U9 1706 aaKnown RBP34.43■■■■□ 3.1
SOD1-203ENST00000470944 ZMYM6O95789 1325 aa34.43■■■■□ 3.1
SOD1-203ENST00000470944 NECTIN1Q15223 517 aa34.43■■■■□ 3.1
SOD1-203ENST00000470944 TMEM39BQ9GZU3 492 aa34.43■■■■□ 3.1
SOD1-203ENST00000470944 NAV1Q8NEY1 1877 aa34.42■■■■□ 3.1
SOD1-203ENST00000470944 RASA3Q14644 834 aa34.42■■■■□ 3.1
SOD1-203ENST00000470944 CDAN1Q8IWY9 1227 aa34.42■■■■□ 3.1
SOD1-203ENST00000470944 TAF6LQ9Y6J9 622 aa34.42■■■■□ 3.1
SOD1-203ENST00000470944 DDTLA6NHG4 134 aaPredicted RBP34.41■■■■□ 3.1
SOD1-203ENST00000470944 EIF5BO60841 1220 aaKnown RBP34.41■■■■□ 3.1
SOD1-203ENST00000470944 HAND2P61296 217 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 FAM83AQ86UY5 434 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 MINDY4BA8MYZ0 360 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 PLCD1P51178 756 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 FAM151AQ8WW52 585 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 PGAP2Q9UHJ9 254 aa34.41■■■■□ 3.1
SOD1-203ENST00000470944 APOBEC3FQ8IUX4 373 aaKnown RBP34.4■■■■□ 3.1
SOD1-203ENST00000470944 ZC3H15Q8WU90 426 aaKnown RBP34.4■■■■□ 3.1
SOD1-203ENST00000470944 DEFB129Q9H1M3 183 aa34.4■■■■□ 3.1
SOD1-203ENST00000470944 ARPP21Q9UBL0 812 aaPredicted RBP34.4■■■■□ 3.1
SOD1-203ENST00000470944 CTNNA3Q9UI47 895 aa34.4■■■■□ 3.1
SOD1-203ENST00000470944 EPB41L2O43491 1005 aaKnown RBP34.39■■■■□ 3.1
SOD1-203ENST00000470944 CYP21A2P08686 494 aa34.39■■■■□ 3.1
SOD1-203ENST00000470944 TNFAIP1Q13829 316 aa34.39■■■■□ 3.1
SOD1-203ENST00000470944 NBPF3Q9H094 633 aa34.39■■■■□ 3.1
SOD1-203ENST00000470944 PITPNM2Q9BZ72 1349 aa34.39■■■■□ 3.1
SOD1-203ENST00000470944 SLC27A2O14975 620 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 POLR3DP05423 398 aaPredicted RBP34.38■■■■□ 3.09
SOD1-203ENST00000470944 HSPA4P34932 840 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 SBK1Q52WX2 424 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 C12orf60Q5U649 245 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 CREB3L3Q68CJ9 461 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 DLK2Q6UY11 383 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 ZSCAN29Q8IWY8 852 aaPredicted RBP34.38■■■■□ 3.09
SOD1-203ENST00000470944 TNNI2P48788 182 aa34.38■■■■□ 3.09
SOD1-203ENST00000470944 DCPSQ96C86 337 aaKnown RBP34.38■■■■□ 3.09
SOD1-203ENST00000470944 ATRNL1Q5VV63 1379 aa34.37■■■■□ 3.09
SOD1-203ENST00000470944 SLURP2P0DP57 97 aa34.37■■■■□ 3.09
SOD1-203ENST00000470944 PPARAQ07869 468 aa34.37■■■■□ 3.09
SOD1-203ENST00000470944 CLEC11AQ9Y240 323 aa34.37■■■■□ 3.09
SOD1-203ENST00000470944 CTDSPL2Q05D32 466 aa34.36■■■■□ 3.09
SOD1-203ENST00000470944 PRAMEF18Q5VWM3 479 aa34.36■■■■□ 3.09
SOD1-203ENST00000470944 RASEFQ8IZ41 740 aa34.36■■■■□ 3.09
SOD1-203ENST00000470944 STK11IPQ8N1F8 1099 aa34.36■■■■□ 3.09
SOD1-203ENST00000470944 TEPSINQ96N21 525 aa34.36■■■■□ 3.09
SOD1-203ENST00000470944 GPBP1L1Q9HC44 474 aaPredicted RBP34.36■■■■□ 3.09
SOD1-203ENST00000470944 ZNF213O14771 459 aa34.35■■■■□ 3.09
SOD1-203ENST00000470944 IMMTQ16891 758 aaKnown RBP34.35■■■■□ 3.09
SOD1-203ENST00000470944 MYH1P12882 1939 aa34.35■■■■□ 3.09
SOD1-203ENST00000470944 COL2A1P02458 1487 aaPredicted RBP34.35■■■■□ 3.09
SOD1-203ENST00000470944 ADM5C9JUS6 153 aa34.35■■■■□ 3.09
SOD1-203ENST00000470944 TACC3Q9Y6A5 838 aa34.35■■■■□ 3.09
SOD1-203ENST00000470944 KRT26Q7Z3Y9 468 aa34.34■■■■□ 3.09
SOD1-203ENST00000470944 TBC1D10CQ8IV04 446 aa34.34■■■■□ 3.09
SOD1-203ENST00000470944 DYNLL2Q96FJ2 89 aa34.34■■■■□ 3.09
SOD1-203ENST00000470944 CSRNP1Q96S65 589 aa34.34■■■■□ 3.09
SOD1-203ENST00000470944 DHX36Q9H2U1 1008 aaKnown RBP34.34■■■■□ 3.09
SOD1-203ENST00000470944 UPF2Q9HAU5 1272 aaKnown RBP34.34■■■■□ 3.09
SOD1-203ENST00000470944 INCENPQ9NQS7 918 aa34.34■■■■□ 3.09
SOD1-203ENST00000470944 SULF1Q8IWU6 871 aa34.33■■■■□ 3.09
SOD1-203ENST00000470944 C22orf23Q9BZE7 217 aa34.33■■■■□ 3.09
SOD1-203ENST00000470944 ANAPC4Q9UJX5 808 aa34.33■■■■□ 3.09
SOD1-203ENST00000470944 MAP1SQ66K74 1059 aaPredicted RBP34.33■■■■□ 3.09
SOD1-203ENST00000470944 TTC6Q86TZ1 520 aa34.33■■■■□ 3.09
SOD1-203ENST00000470944 AMOTL1Q8IY63 956 aa34.33■■■■□ 3.09
SOD1-203ENST00000470944 YY1P25490 414 aa34.32■■■■□ 3.08
SOD1-203ENST00000470944 POLR2AP24928 1970 aaKnown RBP34.31■■■■□ 3.08
SOD1-203ENST00000470944 USP48Q86UV5 1035 aa34.31■■■■□ 3.08
SOD1-203ENST00000470944 LDHDQ86WU2 507 aa34.31■■■■□ 3.08
SOD1-203ENST00000470944 KCNB2Q92953 911 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms