RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 CLASRPQ8N2M8 674 aaKnown RBP8.13□□□□□ -1.11
VAMP3-202ENST00000470357 TTLL6Q8N841 843 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 LNPKQ9C0E8 428 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 EXOC6BQ9Y2D4 811 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 AK9Q5TCS8 1911 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 CNTNAP1P78357 1384 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 AOX1Q06278 1338 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 PASKQ96RG2 1323 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 IL15P40933 162 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-202ENST00000470357 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-202ENST00000470357 ST5P78524 1137 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 EPHA10Q5JZY3 1008 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 TTLL11Q8NHH1 800 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 JARID2Q92833 1246 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-202ENST00000470357 GPATCH3Q96I76 525 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
VAMP3-202ENST00000470357 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 EYA2O00167 538 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 SERPINB2P05120 415 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
VAMP3-202ENST00000470357 SF3B3Q15393 1217 aaKnown RBP8.11□□□□□ -1.11
VAMP3-202ENST00000470357 BICDL1Q6ZP65 573 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 HPS1Q92902 700 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
VAMP3-202ENST00000470357 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 GPR108Q9NPR9 543 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 WASF2Q9Y6W5 498 aa8.11□□□□□ -1.11
VAMP3-202ENST00000470357 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 DLEC1Q9Y238 1755 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 TIAM2Q8IVF5 1701 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 APBB1O00213 710 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 ERC2O15083 957 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 IFIT2P09913 472 aaKnown RBP8.1□□□□□ -1.11
VAMP3-202ENST00000470357 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-202ENST00000470357 ITGA6P23229 1130 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 CTCFP49711 727 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-202ENST00000470357 VEGFBP49765 207 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 PTK2Q05397 1052 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 C2CD5Q86YS7 1000 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 MPHOSPH8Q99549 860 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 PA2G4Q9UQ80 394 aaKnown RBP8.1□□□□□ -1.11
VAMP3-202ENST00000470357 AKAP2Q9Y2D5 859 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 CCDC88AQ3V6T2 1871 aa8.1□□□□□ -1.11
VAMP3-202ENST00000470357 TTC41PQ6P2S7 1318 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 MROH5Q6ZUA9 1318 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
VAMP3-202ENST00000470357 MX1P20591 662 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 IGHMBP2P38935 993 aaKnown RBP8.09□□□□□ -1.11
VAMP3-202ENST00000470357 LBX1P52954 281 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 BMP2KLQ5H9B9 411 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 ZBTB33Q86T24 672 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 MPNDQ8N594 471 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 SIL1Q9H173 461 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 GREM2Q9H772 168 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 STAP2Q9UGK3 403 aa8.09□□□□□ -1.11
VAMP3-202ENST00000470357 LTBP3Q9NS15 1303 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 H0YIN7 160 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 C21orf2O43822 256 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
VAMP3-202ENST00000470357 SASH1O94885 1247 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 AVPP01185 164 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 RGS19P49795 217 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 PDE1AP54750 535 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 DDX46Q7L014 1031 aaKnown RBP8.08□□□□□ -1.12
VAMP3-202ENST00000470357 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 AACSQ86V21 672 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 ANKRD18AQ8IVF6 992 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 SYNE4Q8N205 404 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 CDK15Q96Q40 435 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 IL1RAPL2Q9NP60 686 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 ABCC12Q96J65 1359 aa8.08□□□□□ -1.12
VAMP3-202ENST00000470357 A0A1B0GUL6 1792 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 FER1L6Q2WGJ9 1857 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 ANKRD31Q8N7Z5 1873 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 ARAP2Q8WZ64 1704 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 GLRX3O76003 335 aaKnown RBP8.07□□□□□ -1.12
VAMP3-202ENST00000470357 HSPA8P11142 646 aaKnown RBP8.07□□□□□ -1.12
VAMP3-202ENST00000470357 PDE6BP35913 854 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 GRM5P41594 1212 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
VAMP3-202ENST00000470357 METTL24Q5JXM2 366 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms