RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 CAP1Q01518 475 aa38.56■■■■□ 3.76
HMG20B-209ENST00000470356 TBC1D9Q6ZT07 1266 aa38.56■■■■□ 3.76
HMG20B-209ENST00000470356 SH3BP5LQ7L8J4 393 aa38.56■■■■□ 3.76
HMG20B-209ENST00000470356 GOLGA6L2Q8N9W4 650 aaPredicted RBP38.56■■■■□ 3.76
HMG20B-209ENST00000470356 C1orf115Q9H7X2 142 aa38.56■■■■□ 3.76
HMG20B-209ENST00000470356 TLR2O60603 784 aa38.55■■■■□ 3.76
HMG20B-209ENST00000470356 LDHCP07864 332 aa38.55■■■■□ 3.76
HMG20B-209ENST00000470356 MCAMP43121 646 aa38.55■■■■□ 3.76
HMG20B-209ENST00000470356 MAP3K10Q02779 954 aa38.55■■■■□ 3.76
HMG20B-209ENST00000470356 ZSCAN29Q8IWY8 852 aaPredicted RBP38.55■■■■□ 3.76
HMG20B-209ENST00000470356 NSUN4Q96CB9 384 aaKnown RBP38.55■■■■□ 3.76
HMG20B-209ENST00000470356 DDX4Q9NQI0 724 aaKnown RBP38.55■■■■□ 3.76
HMG20B-209ENST00000470356 KIAA0100Q14667 2235 aaKnown RBP38.55■■■■□ 3.76
HMG20B-209ENST00000470356 PHF20L1A8MW92 1017 aa38.54■■■■□ 3.76
HMG20B-209ENST00000470356 SURF6O75683 361 aaKnown RBP38.54■■■■□ 3.76
HMG20B-209ENST00000470356 OS9Q13438 667 aaPredicted RBP38.54■■■■□ 3.76
HMG20B-209ENST00000470356 ARHGEF6Q15052 776 aa38.54■■■■□ 3.76
HMG20B-209ENST00000470356 RHBDL3P58872 404 aa38.53■■■■□ 3.76
HMG20B-209ENST00000470356 TNNI3KQ59H18 835 aa38.53■■■■□ 3.76
HMG20B-209ENST00000470356 NOP58Q9Y2X3 529 aaKnown RBP38.53■■■■□ 3.76
HMG20B-209ENST00000470356 FPGT-TNNI3KV9GXZ4 949 aa38.53■■■■□ 3.76
HMG20B-209ENST00000470356 NPM3O75607 178 aaKnown RBP38.52■■■■□ 3.76
HMG20B-209ENST00000470356 MAP4K4O95819 1239 aaPredicted RBP38.52■■■■□ 3.76
HMG20B-209ENST00000470356 RAI14Q9P0K7 980 aa38.52■■■■□ 3.76
HMG20B-209ENST00000470356 DDTLA6NHG4 134 aaPredicted RBP38.51■■■■□ 3.76
HMG20B-209ENST00000470356 PICALMQ13492 652 aa38.51■■■■□ 3.76
HMG20B-209ENST00000470356 ANKRD23Q86SG2 305 aa38.51■■■■□ 3.76
HMG20B-209ENST00000470356 CCDC158Q5M9N0 1113 aa38.49■■■■□ 3.75
HMG20B-209ENST00000470356 SCYL3Q8IZE3 742 aa38.49■■■■□ 3.75
HMG20B-209ENST00000470356 DBNDD2Q9BQY9 259 aa38.49■■■■□ 3.75
HMG20B-209ENST00000470356 LRP2BPQ9P2M1 347 aa38.49■■■■□ 3.75
HMG20B-209ENST00000470356 CXCL11O14625 94 aa38.48■■■■□ 3.75
HMG20B-209ENST00000470356 MOGSQ13724 837 aa38.47■■■■□ 3.75
HMG20B-209ENST00000470356 TTC39AQ5SRH9 613 aa38.47■■■■□ 3.75
HMG20B-209ENST00000470356 PICK1Q9NRD5 415 aa38.47■■■■□ 3.75
HMG20B-209ENST00000470356 ARMC5Q96C12 935 aa38.46■■■■□ 3.75
HMG20B-209ENST00000470356 PDHXO00330 501 aa38.45■■■■□ 3.75
HMG20B-209ENST00000470356 ZNF512BQ96KM6 892 aaPredicted RBP38.45■■■■□ 3.75
HMG20B-209ENST00000470356 SNRKQ9NRH2 765 aa38.45■■■■□ 3.75
HMG20B-209ENST00000470356 CTNND1O60716 968 aaKnown RBP38.44■■■■□ 3.74
HMG20B-209ENST00000470356 PTPRAP18433 802 aa38.44■■■■□ 3.74
HMG20B-209ENST00000470356 LACTBP83111 547 aaPredicted RBP38.44■■■■□ 3.74
HMG20B-209ENST00000470356 KIF22Q14807 665 aa38.44■■■■□ 3.74
HMG20B-209ENST00000470356 ZHX2Q9Y6X8 837 aa38.44■■■■□ 3.74
HMG20B-209ENST00000470356 TBC1D12O60347 775 aa38.43■■■■□ 3.74
HMG20B-209ENST00000470356 C17orf99Q6UX52 265 aa38.43■■■■□ 3.74
HMG20B-209ENST00000470356 CENPFP49454 3210 aa38.43■■■■□ 3.74
HMG20B-209ENST00000470356 SLURP2P0DP57 97 aa38.42■■■■□ 3.74
HMG20B-209ENST00000470356 CEP85Q6P2H3 762 aa38.42■■■■□ 3.74
HMG20B-209ENST00000470356 PANK1Q8TE04 598 aa38.42■■■■□ 3.74
HMG20B-209ENST00000470356 DOCK1Q14185 1865 aa38.41■■■■□ 3.74
HMG20B-209ENST00000470356 AFG3L2Q9Y4W6 797 aa38.41■■■■□ 3.74
HMG20B-209ENST00000470356 COL2A1P02458 1487 aaPredicted RBP38.41■■■■□ 3.74
HMG20B-209ENST00000470356 GNRH1P01148 92 aa38.4■■■■□ 3.74
HMG20B-209ENST00000470356 NAA16Q6N069 864 aaPredicted RBP38.4■■■■□ 3.74
HMG20B-209ENST00000470356 ARHGAP39Q9C0H5 1083 aa38.4■■■■□ 3.74
HMG20B-209ENST00000470356 DBNLQ9UJU6 430 aaKnown RBP38.4■■■■□ 3.74
HMG20B-209ENST00000470356 ADGRA2Q96PE1 1338 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 IGSF3O75054 1194 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 CYP2E1P05181 493 aaPredicted RBP38.39■■■■□ 3.74
HMG20B-209ENST00000470356 GPAT2Q6NUI2 795 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 TEX11Q8IYF3 940 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 NOL10Q9BSC4 688 aaKnown RBP38.39■■■■□ 3.74
HMG20B-209ENST00000470356 OSBPL5Q9H0X9 879 aaPredicted RBP38.39■■■■□ 3.74
HMG20B-209ENST00000470356 CPA4Q9UI42 421 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 PTCH2Q9Y6C5 1203 aa38.39■■■■□ 3.74
HMG20B-209ENST00000470356 MYO5AQ9Y4I1 1855 aaKnown RBP38.39■■■■□ 3.74
HMG20B-209ENST00000470356 ZSWIM8A7E2V4 1837 aa38.38■■■■□ 3.73
HMG20B-209ENST00000470356 A0A0G2JLL6 359 aaPredicted RBP38.38■■■■□ 3.73
HMG20B-209ENST00000470356 FASTKD5Q7L8L6 764 aaKnown RBP38.38■■■■□ 3.73
HMG20B-209ENST00000470356 PRRT2Q7Z6L0 340 aaPredicted RBP38.38■■■■□ 3.73
HMG20B-209ENST00000470356 EAF2Q96CJ1 260 aaPredicted RBP38.38■■■■□ 3.73
HMG20B-209ENST00000470356 PTPRFP10586 1907 aa38.38■■■■□ 3.73
HMG20B-209ENST00000470356 PHIPQ8WWQ0 1821 aa38.38■■■■□ 3.73
HMG20B-209ENST00000470356 RBBP6Q7Z6E9 1792 aaKnown RBP38.37■■■■□ 3.73
HMG20B-209ENST00000470356 BAG3O95817 575 aa38.37■■■■□ 3.73
HMG20B-209ENST00000470356 MS4A1P11836 297 aa38.37■■■■□ 3.73
HMG20B-209ENST00000470356 SH3RF3Q8TEJ3 882 aaPredicted RBP38.37■■■■□ 3.73
HMG20B-209ENST00000470356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP38.37■■■■□ 3.73
HMG20B-209ENST00000470356 MAST2Q6P0Q8 1798 aa38.36■■■■□ 3.73
HMG20B-209ENST00000470356 POTEFA5A3E0 1075 aa38.36■■■■□ 3.73
HMG20B-209ENST00000470356 PPP4CP60510 307 aa38.36■■■■□ 3.73
HMG20B-209ENST00000470356 PARK7Q99497 189 aaKnown RBP38.36■■■■□ 3.73
HMG20B-209ENST00000470356 PLCG2P16885 1265 aa38.35■■■■□ 3.73
HMG20B-209ENST00000470356 SLC9C1Q4G0N8 1177 aa38.35■■■■□ 3.73
HMG20B-209ENST00000470356 NBPF11Q86T75 865 aa38.35■■■■□ 3.73
HMG20B-209ENST00000470356 CCDC8Q9H0W5 538 aaPredicted RBP38.35■■■■□ 3.73
HMG20B-209ENST00000470356 TLR7Q9NYK1 1049 aaKnown RBP38.35■■■■□ 3.73
HMG20B-209ENST00000470356 ZAP70P43403 619 aa38.34■■■■□ 3.73
HMG20B-209ENST00000470356 ZNF333Q96JL9 665 aa38.34■■■■□ 3.73
HMG20B-209ENST00000470356 AATFQ9NY61 560 aaKnown RBP eCLIP38.34■■■■□ 3.73
HMG20B-209ENST00000470356 FAM196BA6NMK8 535 aa38.33■■■■□ 3.73
HMG20B-209ENST00000470356 PRMT2P55345 433 aa38.33■■■■□ 3.73
HMG20B-209ENST00000470356 ERC1Q8IUD2 1116 aa38.33■■■■□ 3.73
HMG20B-209ENST00000470356 PIH1D3Q9NQM4 214 aaKnown RBP38.32■■■■□ 3.72
HMG20B-209ENST00000470356 SLC45A1Q9Y2W3 748 aa38.32■■■■□ 3.72
HMG20B-209ENST00000470356 CYP2C8P10632 490 aa38.31■■■■□ 3.72
HMG20B-209ENST00000470356 ADGRA1Q86SQ6 560 aa38.31■■■■□ 3.72
HMG20B-209ENST00000470356 EXOC6BQ9Y2D4 811 aa38.31■■■■□ 3.72
HMG20B-209ENST00000470356 CDK5RAP2Q96SN8 1893 aa38.3■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 682.1 ms