RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
LDHB-205ENST00000470280 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
LDHB-205ENST00000470280 TRPA1O75762 1119 aa12.85□□□□□ -0.35
LDHB-205ENST00000470280 VGLL4Q14135 290 aa12.85□□□□□ -0.35
LDHB-205ENST00000470280 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
LDHB-205ENST00000470280 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
LDHB-205ENST00000470280 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
LDHB-205ENST00000470280 ATRNL1Q5VV63 1379 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
LDHB-205ENST00000470280 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 CA12O43570 354 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 ENTPD3O75355 529 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 LDHCP07864 332 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 TM4SF4P48230 202 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 GSTO1P78417 241 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 PICALMQ13492 652 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
LDHB-205ENST00000470280 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
LDHB-205ENST00000470280 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.36
LDHB-205ENST00000470280 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
LDHB-205ENST00000470280 INPP5BP32019 993 aa12.83□□□□□ -0.36
LDHB-205ENST00000470280 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
LDHB-205ENST00000470280 ZKSCAN4Q969J2 545 aaPredicted RBP12.83□□□□□ -0.36
LDHB-205ENST00000470280 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
LDHB-205ENST00000470280 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
LDHB-205ENST00000470280 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
LDHB-205ENST00000470280 MAST2Q6P0Q8 1798 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
LDHB-205ENST00000470280 ZBTB48P10074 688 aaPredicted RBP12.82□□□□□ -0.36
LDHB-205ENST00000470280 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
LDHB-205ENST00000470280 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 LRRCC1Q9C099 1032 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
LDHB-205ENST00000470280 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDHB-205ENST00000470280 CYP7A1P22680 504 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 PPP4CP60510 307 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 TEX11Q8IYF3 940 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 MAGEB6Q8N7X4 407 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDHB-205ENST00000470280 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
LDHB-205ENST00000470280 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
LDHB-205ENST00000470280 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
LDHB-205ENST00000470280 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 GOLIM4O00461 696 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
LDHB-205ENST00000470280 MIGA1Q8NAN2 632 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 PTPN18Q99952 460 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
LDHB-205ENST00000470280 BOLA2Q9H3K6 86 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 CSADQ9Y600 493 aa12.8□□□□□ -0.36
LDHB-205ENST00000470280 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
LDHB-205ENST00000470280 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
LDHB-205ENST00000470280 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
LDHB-205ENST00000470280 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
LDHB-205ENST00000470280 ATP5JP18859 108 aa12.79□□□□□ -0.36
LDHB-205ENST00000470280 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
LDHB-205ENST00000470280 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
LDHB-205ENST00000470280 IGSF3O75054 1194 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 BAG3O95817 575 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 CHGBP05060 677 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 PDE6AP16499 860 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 TSHZ3Q63HK5 1081 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 ERO1BQ86YB8 467 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 TGFBRAP1Q8WUH2 860 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 HAUS7Q99871 368 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 NOL10Q9BSC4 688 aaKnown RBP12.78□□□□□ -0.36
LDHB-205ENST00000470280 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
LDHB-205ENST00000470280 FLT1P17948 1338 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 LAMB1P07942 1786 aa12.78□□□□□ -0.36
LDHB-205ENST00000470280 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
LDHB-205ENST00000470280 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 IRF6O14896 467 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 INHBEP58166 350 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
LDHB-205ENST00000470280 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.37
LDHB-205ENST00000470280 CCL15Q16663 113 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
LDHB-205ENST00000470280 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.37
LDHB-205ENST00000470280 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
LDHB-205ENST00000470280 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms