RNA–Protein interactions for RNA: ENST00000469786.2

PSMD4-209, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-209	ENST00000469786	CACNA1B	Q00975	2339 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	TCP10L2	B9ZVM9	353 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	CXCL11	O14625	94 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	DNAJB2	P25686	324 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	DZIP1L	Q8IYY4	767 aa	Known RBP	10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	TTLL11	Q8NHH1	800 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	CDC5L	Q99459	802 aa	Known RBP	10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786	SERPINA10	Q9UK55	444 aa		10.17	□□□□□ -0.78
PSMD4-209	ENST00000469786		A0A0G2JLL6	359 aa	Predicted RBP	10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	EPHB4	P54760	987 aa		10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	FOXK2	Q01167	660 aa		10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	NOL9	Q5SY16	702 aa	Known RBP	10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	RIC3	Q7Z5B4	369 aa		10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	COA7	Q96BR5	231 aa		10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	CHPF2	Q9P2E5	772 aa		10.16	□□□□□ -0.78
PSMD4-209	ENST00000469786	BRWD1	Q9NSI6	2320 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	PI4K2B	G5E9Z4	385 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	SMIM22	K7EJ46	135 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	SNAP23	O00161	211 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	HSP90B1	P14625	803 aa	Known RBP	10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	PDE3A	Q14432	1141 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	FAM110C	Q1W6H9	321 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	FAM83A	Q86UY5	434 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	BAD	Q92934	168 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	PLEKHF1	Q96S99	279 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	GREM2	Q9H772	168 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	BABAM1	Q9NWV8	329 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	DAGLA	Q9Y4D2	1042 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	LOC285556	D6RIA3	1793 aa		10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.15	□□□□□ -0.78
PSMD4-209	ENST00000469786	FAM86C2P	A6NEL3	165 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	ITGB8	P26012	769 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	TNNI2	P48788	182 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	KCNQ1	P51787	676 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	CTSW	P56202	376 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	TFF2	Q03403	129 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	SNX17	Q15036	470 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	CCDC191	Q8NCU4	936 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	PPM1E	Q8WY54	764 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	JARID2	Q92833	1246 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	TSPYL4	Q9UJ04	414 aa		10.14	□□□□□ -0.79
PSMD4-209	ENST00000469786	PRR33	A8MZF0	331 aa		10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	RBM5	P52756	815 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	RTP1	P59025	263 aa		10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	CACNB2	Q08289	660 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	KRT24	Q2M2I5	525 aa		10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	FKBP1C	Q5VVH2	108 aa		10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	ZNF341	Q9BYN7	854 aa		10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD4-209	ENST00000469786	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	TRIM43B	A6NCK2	446 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	TLL1	O43897	1013 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	XRCC5	P13010	732 aa	Known RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	CCND3	P30281	292 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	CRK	P46108	304 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	SH3RF1	Q7Z6J0	888 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	ANKRD13C	Q8N6S4	541 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	USP6NL	Q92738	828 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	TIFA	Q96CG3	184 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	FBXL18	Q96ME1	805 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	GAS2L1	Q99501	681 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	ANKRD2	Q9GZV1	360 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	KCNH6	Q9H252	994 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	PRDM12	Q9H4Q4	367 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	PDLIM7	Q9NR12	457 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	DOCK1	Q14185	1865 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	ATRNL1	Q5VV63	1379 aa		10.12	□□□□□ -0.79
PSMD4-209	ENST00000469786	CACNB3	P54284	484 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	CCDC85B	Q15834	202 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	NFE2L2	Q16236	605 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	GRIK5	Q16478	980 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	MIGA2	Q7L4E1	593 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	FASTKD5	Q7L8L6	764 aa	Known RBP	10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	CD320	Q9NPF0	282 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	TTF2	Q9UNY4	1162 aa	Known RBP	10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	JAG2	Q9Y219	1238 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	AFG3L2	Q9Y4W6	797 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	ZFHX4	Q86UP3	3567 aa		10.11	□□□□□ -0.79
PSMD4-209	ENST00000469786	DOCK2	Q92608	1830 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	ERC2	O15083	957 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	ATN1	P54259	1190 aa	Predicted RBP	10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	HDLBP	Q00341	1268 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	CHRND	Q07001	517 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	RASIP1	Q5U651	963 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	DCAF15	Q66K64	600 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	IL27	Q8NEV9	243 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	TDRD7	Q8NHU6	1098 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	HOOK2	Q96ED9	719 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	RNPC3	Q96LT9	517 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	PRKAG2	Q9UGJ0	569 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	NUDC	Q9Y266	331 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	CACNA1G	O43497	2377 aa		10.1	□□□□□ -0.79
PSMD4-209	ENST00000469786	PHF20L1	A8MW92	1017 aa		10.09	□□□□□ -0.79
PSMD4-209	ENST00000469786	IGHA2	P01877	340 aa		10.09	□□□□□ -0.79
PSMD4-209	ENST00000469786	PPP2R1A	P30153	589 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms