RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZNF296Q8WUU4 475 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-208ENST00000469744 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-208ENST00000469744 HOOK2Q96ED9 719 aa21.42■■□□□ 1.02
MRPL28-208ENST00000469744 SNCAIPQ9Y6H5 919 aa21.42■■□□□ 1.02
MRPL28-208ENST00000469744 RFX7Q2KHR2 1363 aa21.42■■□□□ 1.02
MRPL28-208ENST00000469744 DCAF15Q66K64 600 aa21.41■■□□□ 1.02
MRPL28-208ENST00000469744 NSUN4Q96CB9 384 aaKnown RBP21.41■■□□□ 1.02
MRPL28-208ENST00000469744 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
MRPL28-208ENST00000469744 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
MRPL28-208ENST00000469744 MAST2Q6P0Q8 1798 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 APBB1O00213 710 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 INPP5BP32019 993 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 INHBEP58166 350 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 PICALMQ13492 652 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
MRPL28-208ENST00000469744 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
MRPL28-208ENST00000469744 GPR25O00155 361 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.02
MRPL28-208ENST00000469744 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 MS4A4AQ96JQ5 239 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 PTPN18Q99952 460 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 IDI2Q9BXS1 227 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 BCL11AQ9H165 835 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.02
MRPL28-208ENST00000469744 GPR75-ASB3A0A0A6YYF3 556 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 CCDC85CA6NKD9 419 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 SLURP2P0DP57 97 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 ZAP70P43403 619 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 RHBDL3P58872 404 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.01
MRPL28-208ENST00000469744 ZSCAN29Q8IWY8 852 aaPredicted RBP21.39■■□□□ 1.01
MRPL28-208ENST00000469744 ALDH1A1P00352 501 aa21.38■■□□□ 1.01
MRPL28-208ENST00000469744 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-208ENST00000469744 GSTO1P78417 241 aa21.38■■□□□ 1.01
MRPL28-208ENST00000469744 AACSQ86V21 672 aa21.38■■□□□ 1.01
MRPL28-208ENST00000469744 ERC1Q8IUD2 1116 aa21.38■■□□□ 1.01
MRPL28-208ENST00000469744 RPAP2Q8IXW5 612 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-208ENST00000469744 BRI3BPQ8WY22 251 aa21.38■■□□□ 1.01
MRPL28-208ENST00000469744 DDTLA6NHG4 134 aaPredicted RBP21.37■■□□□ 1.01
MRPL28-208ENST00000469744 ENTPD3O75355 529 aa21.37■■□□□ 1.01
MRPL28-208ENST00000469744 CTU1Q7Z7A3 348 aaKnown RBP21.37■■□□□ 1.01
MRPL28-208ENST00000469744 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
MRPL28-208ENST00000469744 ERO1BQ86YB8 467 aa21.37■■□□□ 1.01
MRPL28-208ENST00000469744 CFHR5Q9BXR6 569 aa21.37■■□□□ 1.01
MRPL28-208ENST00000469744 PIH1D3Q9NQM4 214 aaKnown RBP21.37■■□□□ 1.01
MRPL28-208ENST00000469744 NDUFB9Q9Y6M9 179 aa21.37■■□□□ 1.01
MRPL28-208ENST00000469744 ATRNL1Q5VV63 1379 aa21.36■■□□□ 1.01
MRPL28-208ENST00000469744 CCL15-CCL14A0A0B4J2E2 113 aa21.36■■□□□ 1.01
MRPL28-208ENST00000469744 TESPA1A2RU30 521 aaPredicted RBP21.36■■□□□ 1.01
MRPL28-208ENST00000469744 LDHCP07864 332 aa21.36■■□□□ 1.01
MRPL28-208ENST00000469744 CCL15Q16663 113 aa21.36■■□□□ 1.01
MRPL28-208ENST00000469744 RHPN1Q8TCX5 695 aa21.36■■□□□ 1.01
MRPL28-208ENST00000469744 IRF6O14896 467 aa21.35■■□□□ 1.01
MRPL28-208ENST00000469744 GTF2A2P52657 109 aa21.35■■□□□ 1.01
MRPL28-208ENST00000469744 CRHR2Q13324 411 aa21.35■■□□□ 1.01
MRPL28-208ENST00000469744 NAA16Q6N069 864 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-208ENST00000469744 ZNF512BQ96KM6 892 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-208ENST00000469744 ZNF112Q9UJU3 913 aa21.35■■□□□ 1.01
MRPL28-208ENST00000469744 FKTNO75072 461 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 HMMRO75330 724 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 OTUD7BQ6GQQ9 843 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 CDK5RAP2Q96SN8 1893 aa21.34■■□□□ 1.01
MRPL28-208ENST00000469744 SH3RF3Q8TEJ3 882 aaPredicted RBP21.33■■□□□ 1.01
MRPL28-208ENST00000469744 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
MRPL28-208ENST00000469744 PPIL2Q13356 520 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 NOM1Q5C9Z4 860 aaKnown RBP21.32■■□□□ 1
MRPL28-208ENST00000469744 TEX11Q8IYF3 940 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 FAM43AQ8N2R8 423 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 DCTPP1Q9H773 170 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 FAM196BA6NMK8 535 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 PHF20L1A8MW92 1017 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 KIF1BPQ96EK5 621 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 NOL10Q9BSC4 688 aaKnown RBP21.32■■□□□ 1
MRPL28-208ENST00000469744 ANTXR1Q9H6X2 564 aa21.32■■□□□ 1
MRPL28-208ENST00000469744 IDH1O75874 414 aaKnown RBP21.31■■□□□ 1
MRPL28-208ENST00000469744 SNAPC2Q13487 334 aa21.31■■□□□ 1
MRPL28-208ENST00000469744 DOCK1Q14185 1865 aa21.3■■□□□ 1
MRPL28-208ENST00000469744 CETPP11597 493 aa21.3■■□□□ 1
MRPL28-208ENST00000469744 PPATQ06203 517 aa21.3■■□□□ 1
MRPL28-208ENST00000469744 TAF1CQ15572 869 aaPredicted RBP21.3■■□□□ 1
MRPL28-208ENST00000469744 NOL9Q5SY16 702 aaKnown RBP21.3■■□□□ 1
MRPL28-208ENST00000469744 OSBPL5Q9H0X9 879 aaPredicted RBP21.3■■□□□ 1
MRPL28-208ENST00000469744 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
MRPL28-208ENST00000469744 FOCADQ5VW36 1801 aa21.29■■□□□ 1
MRPL28-208ENST00000469744 BTBD19C9JJ37 291 aa21.29■■□□□ 1
MRPL28-208ENST00000469744 CLASRPQ8N2M8 674 aaKnown RBP21.29■■□□□ 1
MRPL28-208ENST00000469744 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.29■■□□□ 1
MRPL28-208ENST00000469744 CYP7A1P22680 504 aa21.28■■□□□ 1
MRPL28-208ENST00000469744 DYNLL1P63167 89 aaKnown RBP21.28■■□□□ 1
MRPL28-208ENST00000469744 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
MRPL28-208ENST00000469744 SIPA1L1O43166 1804 aa21.28■■□□□ 1
MRPL28-208ENST00000469744 HTTP42858 3142 aa21.28■■□□□ 1
MRPL28-208ENST00000469744 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
MRPL28-208ENST00000469744 BAG3O95817 575 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 MAP4K4O95819 1239 aaPredicted RBP21.27■■□□□ 1
MRPL28-208ENST00000469744 IFIT2P09913 472 aaKnown RBP21.27■■□□□ 1
MRPL28-208ENST00000469744 MAP3K10Q02779 954 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms