RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.35■■□□□ 1.33
TRAK1-207ENST00000469506 CEP290O15078 2479 aa23.35■■□□□ 1.33
TRAK1-207ENST00000469506 MYO5AQ9Y4I1 1855 aaKnown RBP23.34■■□□□ 1.33
TRAK1-207ENST00000469506 PSMC4P43686 418 aa23.34■■□□□ 1.33
TRAK1-207ENST00000469506 KIF22Q14807 665 aa23.34■■□□□ 1.33
TRAK1-207ENST00000469506 PDS5AQ29RF7 1337 aaKnown RBP23.33■■□□□ 1.33
TRAK1-207ENST00000469506 BCAR3O75815 825 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 CYP2C8P10632 490 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 TRIM27P14373 513 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 PTPRAP18433 802 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 BTDP43251 543 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 RHBDL3P58872 404 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 MECOMQ03112 1051 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 SLC4A8Q2Y0W8 1093 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
TRAK1-207ENST00000469506 HDAC5Q9UQL6 1122 aa23.33■■□□□ 1.33
TRAK1-207ENST00000469506 PNMA6EA0A0J9YXQ4 647 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 CXCL11O14625 94 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 GNAI3P08754 354 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 OSBPP22059 807 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 MTFR1Q15390 333 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 TBC1D9Q6ZT07 1266 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 CCDC84Q86UT8 332 aaPredicted RBP23.32■■□□□ 1.32
TRAK1-207ENST00000469506 SCYL3Q8IZE3 742 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 ZGPATQ8N5A5 531 aaKnown RBP23.32■■□□□ 1.32
TRAK1-207ENST00000469506 HMG20BQ9P0W2 317 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 ZHX2Q9Y6X8 837 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 MROH7-TTC4A0A0A0MT08 1334 aa23.32■■□□□ 1.32
TRAK1-207ENST00000469506 ATAD5Q96QE3 1844 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 CCER2I3L3R5 266 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 GNRH1P01148 92 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 BCRP11274 1271 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 PCDH10Q9P2E7 1040 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 AFG3L2Q9Y4W6 797 aa23.31■■□□□ 1.32
TRAK1-207ENST00000469506 GPR75-ASB3A0A0A6YYF3 556 aa23.3■■□□□ 1.32
TRAK1-207ENST00000469506 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
TRAK1-207ENST00000469506 PICALMQ13492 652 aa23.3■■□□□ 1.32
TRAK1-207ENST00000469506 HABP4Q5JVS0 413 aaKnown RBP23.3■■□□□ 1.32
TRAK1-207ENST00000469506 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
TRAK1-207ENST00000469506 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
TRAK1-207ENST00000469506 CDK5RAP2Q96SN8 1893 aa23.3■■□□□ 1.32
TRAK1-207ENST00000469506 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
TRAK1-207ENST00000469506 CLUAP1Q96AJ1 413 aa23.29■■□□□ 1.32
TRAK1-207ENST00000469506 SHISA4Q96DD7 197 aa23.29■■□□□ 1.32
TRAK1-207ENST00000469506 AKAP2Q9Y2D5 859 aa23.29■■□□□ 1.32
TRAK1-207ENST00000469506 SIPA1L1O43166 1804 aa23.29■■□□□ 1.32
TRAK1-207ENST00000469506 FAM196BA6NMK8 535 aa23.28■■□□□ 1.32
TRAK1-207ENST00000469506 PRMT2P55345 433 aa23.28■■□□□ 1.32
TRAK1-207ENST00000469506 MVPQ14764 893 aaKnown RBP23.28■■□□□ 1.32
TRAK1-207ENST00000469506 SPTY2D1Q68D10 685 aaPredicted RBP23.28■■□□□ 1.32
TRAK1-207ENST00000469506 ERICH6Q7L0X2 663 aa23.28■■□□□ 1.32
TRAK1-207ENST00000469506 FMNL1O95466 1100 aaPredicted RBP23.27■■□□□ 1.32
TRAK1-207ENST00000469506 RRP1BQ14684 758 aaKnown RBP23.27■■□□□ 1.32
TRAK1-207ENST00000469506 ATF7IPQ6VMQ6 1270 aa23.27■■□□□ 1.32
TRAK1-207ENST00000469506 SPATA5Q8NB90 893 aa23.27■■□□□ 1.32
TRAK1-207ENST00000469506 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
TRAK1-207ENST00000469506 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
TRAK1-207ENST00000469506 GABRQQ9UN88 632 aa23.27■■□□□ 1.32
TRAK1-207ENST00000469506 ARID4AP29374 1257 aaPredicted RBP23.26■■□□□ 1.31
TRAK1-207ENST00000469506 MCAMP43121 646 aa23.26■■□□□ 1.31
TRAK1-207ENST00000469506 PRKCZQ05513 592 aa23.26■■□□□ 1.31
TRAK1-207ENST00000469506 GADL1Q6ZQY3 521 aa23.26■■□□□ 1.31
TRAK1-207ENST00000469506 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
TRAK1-207ENST00000469506 PICK1Q9NRD5 415 aa23.26■■□□□ 1.31
TRAK1-207ENST00000469506 MYPNQ86TC9 1320 aa23.26■■□□□ 1.31
TRAK1-207ENST00000469506 CTNND1O60716 968 aaKnown RBP23.25■■□□□ 1.31
TRAK1-207ENST00000469506 GNAI2P04899 355 aa23.25■■□□□ 1.31
TRAK1-207ENST00000469506 GRK4P32298 578 aa23.25■■□□□ 1.31
TRAK1-207ENST00000469506 SLF2Q8IX21 1173 aa23.25■■□□□ 1.31
TRAK1-207ENST00000469506 GCC1Q96CN9 775 aa23.25■■□□□ 1.31
TRAK1-207ENST00000469506 TRIM75PA6NK02 468 aa23.24■■□□□ 1.31
TRAK1-207ENST00000469506 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
TRAK1-207ENST00000469506 TMEM57Q8N5G2 664 aa23.24■■□□□ 1.31
TRAK1-207ENST00000469506 LOC285556D6RIA3 1793 aa23.24■■□□□ 1.31
TRAK1-207ENST00000469506 TBC1D12O60347 775 aa23.23■■□□□ 1.31
TRAK1-207ENST00000469506 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
TRAK1-207ENST00000469506 HOXD10P28358 340 aa23.23■■□□□ 1.31
TRAK1-207ENST00000469506 RAET1EQ8TD07 263 aa23.23■■□□□ 1.31
TRAK1-207ENST00000469506 FOCADQ5VW36 1801 aa23.23■■□□□ 1.31
TRAK1-207ENST00000469506 IPO8O15397 1037 aaKnown RBP23.22■■□□□ 1.31
TRAK1-207ENST00000469506 TREML2Q5T2D2 321 aa23.22■■□□□ 1.31
TRAK1-207ENST00000469506 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
TRAK1-207ENST00000469506 TRIOBPQ9H2D6 2365 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 CCL5P13501 91 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 FCGRTP55899 365 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRAK1-207ENST00000469506 POLA2Q14181 598 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 GORABQ5T7V8 394 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 UBE2Q1Q7Z7E8 422 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 SH3RF3Q8TEJ3 882 aaPredicted RBP23.21■■□□□ 1.31
TRAK1-207ENST00000469506 OSBPL5Q9H0X9 879 aaPredicted RBP23.21■■□□□ 1.31
TRAK1-207ENST00000469506 RAI14Q9P0K7 980 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 COLQQ9Y215 455 aaPredicted RBP23.21■■□□□ 1.31
TRAK1-207ENST00000469506 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
TRAK1-207ENST00000469506 MAST2Q6P0Q8 1798 aa23.2■■□□□ 1.3
TRAK1-207ENST00000469506 H0YGN5 161 aa23.2■■□□□ 1.3
TRAK1-207ENST00000469506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRAK1-207ENST00000469506 COL2A1P02458 1487 aaPredicted RBP23.19■■□□□ 1.3
TRAK1-207ENST00000469506 LDHCP07864 332 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms