RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MROH7-TTC4A0A0A0MT08 1334 aa26.04■■□□□ 1.76
COL9A3-207ENST00000467819 PHIPQ8WWQ0 1821 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 GORABQ5T7V8 394 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 ERICH6Q7L0X2 663 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 SH3BP5LQ7L8J4 393 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 NBPF11Q86T75 865 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 TMEM106CQ9BVX2 250 aa26.03■■□□□ 1.76
COL9A3-207ENST00000467819 DDX4Q9NQI0 724 aaKnown RBP26.03■■□□□ 1.76
COL9A3-207ENST00000467819 MGAMO43451 1857 aa26.02■■□□□ 1.76
COL9A3-207ENST00000467819 PNMA6EA0A0J9YXQ4 647 aa26.02■■□□□ 1.76
COL9A3-207ENST00000467819 MYCP01106 439 aaPredicted RBP26.02■■□□□ 1.76
COL9A3-207ENST00000467819 MECOMQ03112 1051 aa26.02■■□□□ 1.76
COL9A3-207ENST00000467819 C17orf99Q6UX52 265 aa26.02■■□□□ 1.76
COL9A3-207ENST00000467819 FAM163AQ96GL9 167 aaPredicted RBP26.02■■□□□ 1.76
COL9A3-207ENST00000467819 HMG20BQ9P0W2 317 aa26.02■■□□□ 1.76
COL9A3-207ENST00000467819 DDTLA6NHG4 134 aaPredicted RBP26.01■■□□□ 1.75
COL9A3-207ENST00000467819 PHF20L1A8MW92 1017 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 SLURP2P0DP57 97 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 MOGSQ13724 837 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 PI16Q6UXB8 463 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 SCYL3Q8IZE3 742 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 PICK1Q9NRD5 415 aa26.01■■□□□ 1.75
COL9A3-207ENST00000467819 G3BP1Q13283 466 aaKnown RBP eCLIP26■■□□□ 1.75
COL9A3-207ENST00000467819 SH3TC2Q8TF17 1288 aa26■■□□□ 1.75
COL9A3-207ENST00000467819 ZNF384Q8TF68 577 aa26■■□□□ 1.75
COL9A3-207ENST00000467819 ADGRA2Q96PE1 1338 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 SLC4A8Q2Y0W8 1093 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 TBC1D9Q6ZT07 1266 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 TMEM57Q8N5G2 664 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 SPATA5Q8NB90 893 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 ZHX2Q9Y6X8 837 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 ATAD5Q96QE3 1844 aa25.99■■□□□ 1.75
COL9A3-207ENST00000467819 CXCL11O14625 94 aa25.98■■□□□ 1.75
COL9A3-207ENST00000467819 CTGFP29279 349 aa25.98■■□□□ 1.75
COL9A3-207ENST00000467819 GPR75-ASB3A0A0A6YYF3 556 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 GNRH1P01148 92 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 PTPRAP18433 802 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 ARID4AP29374 1257 aaPredicted RBP25.97■■□□□ 1.75
COL9A3-207ENST00000467819 PSMC4P43686 418 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 RHBDL3P58872 404 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 ZKSCAN2Q63HK3 967 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 GPAT2Q6NUI2 795 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 TRIM47Q96LD4 638 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 PARK7Q99497 189 aaKnown RBP25.97■■□□□ 1.75
COL9A3-207ENST00000467819 MYO5AQ9Y4I1 1855 aaKnown RBP25.97■■□□□ 1.75
COL9A3-207ENST00000467819 MAST2Q6P0Q8 1798 aa25.97■■□□□ 1.75
COL9A3-207ENST00000467819 PRMT2P55345 433 aa25.96■■□□□ 1.75
COL9A3-207ENST00000467819 GADL1Q6ZQY3 521 aa25.96■■□□□ 1.75
COL9A3-207ENST00000467819 NSUN4Q96CB9 384 aaKnown RBP25.96■■□□□ 1.75
COL9A3-207ENST00000467819 RAI14Q9P0K7 980 aa25.96■■□□□ 1.75
COL9A3-207ENST00000467819 FMNL1O95466 1100 aaPredicted RBP25.95■■□□□ 1.74
COL9A3-207ENST00000467819 CYP2C8P10632 490 aa25.95■■□□□ 1.74
COL9A3-207ENST00000467819 MCAMP43121 646 aa25.95■■□□□ 1.74
COL9A3-207ENST00000467819 GSTO1P78417 241 aa25.95■■□□□ 1.74
COL9A3-207ENST00000467819 MAP3K10Q02779 954 aa25.95■■□□□ 1.74
COL9A3-207ENST00000467819 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.95■■□□□ 1.74
COL9A3-207ENST00000467819 AFG3L2Q9Y4W6 797 aa25.95■■□□□ 1.74
COL9A3-207ENST00000467819 CDK5RAP2Q96SN8 1893 aa25.94■■□□□ 1.74
COL9A3-207ENST00000467819 A0A0G2JLL6 359 aaPredicted RBP25.94■■□□□ 1.74
COL9A3-207ENST00000467819 LDHCP07864 332 aa25.94■■□□□ 1.74
COL9A3-207ENST00000467819 OSBPP22059 807 aa25.94■■□□□ 1.74
COL9A3-207ENST00000467819 FASTKD5Q7L8L6 764 aaKnown RBP25.94■■□□□ 1.74
COL9A3-207ENST00000467819 PRRT2Q7Z6L0 340 aaPredicted RBP25.94■■□□□ 1.74
COL9A3-207ENST00000467819 SRRDQ9UH36 339 aa25.94■■□□□ 1.74
COL9A3-207ENST00000467819 FAM196BA6NMK8 535 aa25.93■■□□□ 1.74
COL9A3-207ENST00000467819 CTNND1O60716 968 aaKnown RBP25.93■■□□□ 1.74
COL9A3-207ENST00000467819 UQCRFS1P1P0C7P4 283 aa25.93■■□□□ 1.74
COL9A3-207ENST00000467819 HNRNPUQ00839 825 aaKnown RBP eCLIP25.93■■□□□ 1.74
COL9A3-207ENST00000467819 CCDC84Q86UT8 332 aaPredicted RBP25.93■■□□□ 1.74
COL9A3-207ENST00000467819 OS9Q13438 667 aaPredicted RBP25.92■■□□□ 1.74
COL9A3-207ENST00000467819 C1orf115Q9H7X2 142 aa25.92■■□□□ 1.74
COL9A3-207ENST00000467819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.92■■□□□ 1.74
COL9A3-207ENST00000467819 LRP2BPQ9P2M1 347 aa25.92■■□□□ 1.74
COL9A3-207ENST00000467819 MYPNQ86TC9 1320 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 TRIM75PA6NK02 468 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 BCRP11274 1271 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 HOXD10P28358 340 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 RAET1EQ8TD07 263 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 SNRKQ9NRH2 765 aa25.91■■□□□ 1.74
COL9A3-207ENST00000467819 NPM3O75607 178 aaKnown RBP25.9■■□□□ 1.74
COL9A3-207ENST00000467819 POLA2Q14181 598 aa25.9■■□□□ 1.74
COL9A3-207ENST00000467819 TTC39AQ5SRH9 613 aa25.9■■□□□ 1.74
COL9A3-207ENST00000467819 FTSJ3Q8IY81 847 aaKnown RBP25.9■■□□□ 1.74
COL9A3-207ENST00000467819 TEX11Q8IYF3 940 aa25.9■■□□□ 1.74
COL9A3-207ENST00000467819 OSBPL5Q9H0X9 879 aaPredicted RBP25.9■■□□□ 1.74
COL9A3-207ENST00000467819 SIPA1L1O43166 1804 aa25.9■■□□□ 1.74
COL9A3-207ENST00000467819 FOCADQ5VW36 1801 aa25.9■■□□□ 1.74
COL9A3-207ENST00000467819 COL2A1P02458 1487 aaPredicted RBP25.9■■□□□ 1.74
COL9A3-207ENST00000467819 MAP4K4O95819 1239 aaPredicted RBP25.89■■□□□ 1.74
COL9A3-207ENST00000467819 FCGRTP55899 365 aa25.89■■□□□ 1.74
COL9A3-207ENST00000467819 MTFR1Q15390 333 aa25.89■■□□□ 1.74
COL9A3-207ENST00000467819 TNNI3KQ59H18 835 aa25.89■■□□□ 1.74
COL9A3-207ENST00000467819 DBNDD2Q9BQY9 259 aa25.89■■□□□ 1.74
COL9A3-207ENST00000467819 FPGT-TNNI3KV9GXZ4 949 aa25.89■■□□□ 1.74
COL9A3-207ENST00000467819 LOC285556D6RIA3 1793 aa25.89■■□□□ 1.73
COL9A3-207ENST00000467819 CEP290O15078 2479 aa25.89■■□□□ 1.73
COL9A3-207ENST00000467819 TBC1D12O60347 775 aa25.88■■□□□ 1.73
COL9A3-207ENST00000467819 GRK4P32298 578 aa25.88■■□□□ 1.73
COL9A3-207ENST00000467819 ATP8B2P98198 1209 aa25.88■■□□□ 1.73
COL9A3-207ENST00000467819 SSH3Q8TE77 659 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms