RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 IDI2Q9BXS1 227 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 RNF208Q9H0X6 261 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 PRO3102Q9H379 93 aa11.17□□□□□ -0.62
PTPDC1-203ENST00000467049 GAKO14976 1311 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 PHF20L1A8MW92 1017 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 ECM2O94769 699 aaPredicted RBP11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 NR2E3Q9Y5X4 410 aa11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
PTPDC1-203ENST00000467049 E9PSI1 815 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 RGS3P49796 1198 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 IRF5Q13568 498 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 FAM9BQ8IZU0 186 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 GABRQQ9UN88 632 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 AFG3L2Q9Y4W6 797 aa11.15□□□□□ -0.62
PTPDC1-203ENST00000467049 CYP2C8P10632 490 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 PTPRAP18433 802 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 SLF2Q8IX21 1173 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.63
PTPDC1-203ENST00000467049 CENPFP49454 3210 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 A0A1W2PPC1 479 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 ADCY3O60266 1144 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 SGPL1O95470 568 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 PHKA1P46020 1223 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
PTPDC1-203ENST00000467049 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
PTPDC1-203ENST00000467049 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
PTPDC1-203ENST00000467049 FLT3LGP49771 235 aa11.13□□□□□ -0.63
PTPDC1-203ENST00000467049 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
PTPDC1-203ENST00000467049 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 INHAP05111 366 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 SIL1Q9H173 461 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 COPRSQ9NQ92 184 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 TBC1D12O60347 775 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 MAP4K4O95819 1239 aaPredicted RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 PAK6Q9NQU5 681 aaPredicted RBP11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 AGTPBP1Q9UPW5 1226 aa11.12□□□□□ -0.63
PTPDC1-203ENST00000467049 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 CDK5RAP2Q96SN8 1893 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 DDTLA6NHG4 134 aaPredicted RBP11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 ADORA1P30542 326 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 SMCR8Q8TEV9 937 aaPredicted RBP11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 COA7Q96BR5 231 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 MROH7-TTC4A0A0A0MT08 1334 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
PTPDC1-203ENST00000467049 ELNP15502 786 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 BTDP43251 543 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 FAM110CQ1W6H9 321 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 DDX4Q9NQI0 724 aaKnown RBP11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 DDX60LQ5H9U9 1706 aaKnown RBP11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 BRCA2P51587 3418 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 EVI5O60447 810 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
PTPDC1-203ENST00000467049 TRIM75PA6NK02 468 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 GCLCP48506 637 aaPredicted RBP11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 RHBDL3P58872 404 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 PICALMQ13492 652 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 MVPQ14764 893 aaKnown RBP11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 API5Q9BZZ5 524 aaKnown RBP11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
PTPDC1-203ENST00000467049 PA2G4Q9UQ80 394 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms