RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 TRIM32Q13049 653 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 G2E3Q7L622 706 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 TSPYL6Q8N831 410 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 RAPGEFL1Q9UHV5 662 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 IQSEC3Q9UPP2 1182 aaPredicted RBP18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 ZHX2Q9Y6X8 837 aa18.67■□□□□ 0.58
HMGXB4-206ENST00000466438 LRRC26Q2I0M4 334 aa18.66■□□□□ 0.58
HMGXB4-206ENST00000466438 HHIPL2Q6UWX4 724 aa18.66■□□□□ 0.58
HMGXB4-206ENST00000466438 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
HMGXB4-206ENST00000466438 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
HMGXB4-206ENST00000466438 SUGT1Q9Y2Z0 365 aa18.66■□□□□ 0.58
HMGXB4-206ENST00000466438 PTPRFP10586 1907 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 FBXO33Q7Z6M2 555 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 FAM122AQ96E09 287 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 LBHD1Q9BQE6 289 aaPredicted RBP18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 PICK1Q9NRD5 415 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 AFG3L2Q9Y4W6 797 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 CDH23Q9H251 3354 aa18.65■□□□□ 0.58
HMGXB4-206ENST00000466438 FRAT2O75474 233 aaPredicted RBP18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 PTPRAP18433 802 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 TCP10Q12799 353 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 MAP3K21Q5TCX8 1036 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 DNAAF4Q8WXU2 420 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 MYLIPQ8WY64 445 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 GJD2Q9UKL4 321 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 AGTPBP1Q9UPW5 1226 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 AK9Q5TCS8 1911 aa18.64■□□□□ 0.57
HMGXB4-206ENST00000466438 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
HMGXB4-206ENST00000466438 RALBP1Q15311 655 aa18.63■□□□□ 0.57
HMGXB4-206ENST00000466438 TRIB2Q92519 343 aa18.63■□□□□ 0.57
HMGXB4-206ENST00000466438 PNMA3Q9UL41 463 aa18.63■□□□□ 0.57
HMGXB4-206ENST00000466438 PHF20L1A8MW92 1017 aa18.62■□□□□ 0.57
HMGXB4-206ENST00000466438 FOSL2P15408 326 aa18.62■□□□□ 0.57
HMGXB4-206ENST00000466438 FLIIQ13045 1269 aa18.62■□□□□ 0.57
HMGXB4-206ENST00000466438 ATRNL1Q5VV63 1379 aa18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 PRKAR2AP13861 404 aaKnown RBP18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 NFIAQ12857 509 aa18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 CAVIN4Q5BKX8 364 aa18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 EPHA10Q5JZY3 1008 aa18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
HMGXB4-206ENST00000466438 MAST2Q6P0Q8 1798 aa18.6■□□□□ 0.57
HMGXB4-206ENST00000466438 DNAH12Q6ZR08 3092 aa18.6■□□□□ 0.57
HMGXB4-206ENST00000466438 GCLCP48506 637 aaPredicted RBP18.6■□□□□ 0.57
HMGXB4-206ENST00000466438 FKBP5Q13451 457 aaPredicted RBP18.6■□□□□ 0.57
HMGXB4-206ENST00000466438 TTYH1Q9H313 450 aaPredicted RBP18.6■□□□□ 0.57
HMGXB4-206ENST00000466438 DOCK2Q92608 1830 aa18.59■□□□□ 0.57
HMGXB4-206ENST00000466438 TRIM75PA6NK02 468 aa18.59■□□□□ 0.57
HMGXB4-206ENST00000466438 CDC42EP5Q6NZY7 148 aa18.59■□□□□ 0.57
HMGXB4-206ENST00000466438 FAM198AQ9UFP1 575 aa18.59■□□□□ 0.57
HMGXB4-206ENST00000466438 PLXNB2O15031 1838 aa18.58■□□□□ 0.57
HMGXB4-206ENST00000466438 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
HMGXB4-206ENST00000466438 MROH5Q6ZUA9 1318 aa18.58■□□□□ 0.57
HMGXB4-206ENST00000466438 TMEM265A0A087WTH1 108 aa18.58■□□□□ 0.56
HMGXB4-206ENST00000466438 TREML2Q5T2D2 321 aa18.58■□□□□ 0.56
HMGXB4-206ENST00000466438 PUS3Q9BZE2 481 aaKnown RBP18.58■□□□□ 0.56
HMGXB4-206ENST00000466438 DAGLAQ9Y4D2 1042 aa18.58■□□□□ 0.56
HMGXB4-206ENST00000466438 DOCK1Q14185 1865 aa18.58■□□□□ 0.56
HMGXB4-206ENST00000466438 SMAD3P84022 425 aaKnown RBP18.57■□□□□ 0.56
HMGXB4-206ENST00000466438 LHX8Q68G74 356 aa18.57■□□□□ 0.56
HMGXB4-206ENST00000466438 LTBP2Q14767 1821 aa18.57■□□□□ 0.56
HMGXB4-206ENST00000466438 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 CYP2B6P20813 491 aa18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 SHHQ15465 462 aa18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 PROCA1Q8NCQ7 364 aaPredicted RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 PRKAG2Q9UGJ0 569 aa18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
HMGXB4-206ENST00000466438 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 APAF1O14727 1248 aa18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
HMGXB4-206ENST00000466438 GRM8O00222 908 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 MAP3K10Q02779 954 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 CACNB2Q08289 660 aaPredicted RBP18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 PABPC4Q13310 644 aaKnown RBP eCLIP18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 C9orf50Q5SZB4 431 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 NUDT12Q9BQG2 462 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 USP40Q9NVE5 1235 aa18.54■□□□□ 0.56
HMGXB4-206ENST00000466438 ANP32CO43423 234 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 ZKSCAN1P17029 563 aaPredicted RBP18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 CCND3P30281 292 aaPredicted RBP18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 MAP3K12Q12852 859 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 DIXDC1Q155Q3 683 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 USP38Q8NB14 1042 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 WDR66Q8TBY9 1149 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 SENP6Q9GZR1 1112 aaPredicted RBP18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms