RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 USP54Q70EL1 1684 aa8.27□□□□□ -1.08
NCL-208ENST00000466274 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 ATP9BO43861 1147 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 RPS6KA4O75676 772 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 ALAS2P22557 587 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 ATP1A2P50993 1020 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 FLIIQ13045 1269 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 ITPK1Q13572 414 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 DGKZQ13574 1117 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 XP32Q5T750 250 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
NCL-208ENST00000466274 MDFIQ99750 246 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 MEGF6O75095 1541 aa8.27□□□□□ -1.09
NCL-208ENST00000466274 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 MAP2K2P36507 400 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 PSMA6P60900 246 aaKnown RBP8.26□□□□□ -1.09
NCL-208ENST00000466274 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
NCL-208ENST00000466274 TSEN2Q8NCE0 465 aaKnown RBP8.26□□□□□ -1.09
NCL-208ENST00000466274 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 TAF1DQ9H5J8 278 aaPredicted RBP8.26□□□□□ -1.09
NCL-208ENST00000466274 SMG6Q86US8 1419 aaKnown RBP8.26□□□□□ -1.09
NCL-208ENST00000466274 PKD1L3Q7Z443 1732 aa8.26□□□□□ -1.09
NCL-208ENST00000466274 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 SIN3BO75182 1162 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 DDNO94850 711 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 C1orf53Q5VUE5 145 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 COG3Q96JB2 828 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 ZNF594Q96JF6 807 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 CAPNS2Q96L46 248 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 SPG7Q9UQ90 795 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
NCL-208ENST00000466274 CNTNAP4Q9C0A0 1308 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
NCL-208ENST00000466274 ADARB2-AS1A8MUL3 147 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 H0YIN7 160 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 NFKBIEO00221 500 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 CYP27B1O15528 508 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 DOC2BQ14184 412 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
NCL-208ENST00000466274 SBNO2Q9Y2G9 1366 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 M0R082 166 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 POLRMTO00411 1230 aaKnown RBP8.23□□□□□ -1.09
NCL-208ENST00000466274 C21orf2O43822 256 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 DKK1O94907 266 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 HIRAP54198 1017 aaPredicted RBP8.23□□□□□ -1.09
NCL-208ENST00000466274 DDR1Q08345 913 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 GRM1Q13255 1194 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 ZNF417Q8TAU3 575 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 SUSD3Q96L08 255 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 ZNF587Q96SQ5 575 aaPredicted RBP8.23□□□□□ -1.09
NCL-208ENST00000466274 BRD7Q9NPI1 651 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 ATG3Q9NT62 314 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 KIF13BQ9NQT8 1826 aa8.23□□□□□ -1.09
NCL-208ENST00000466274 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 N4BP2Q86UW6 1770 aaPredicted RBP8.22□□□□□ -1.09
NCL-208ENST00000466274 EDC4Q6P2E9 1401 aaKnown RBP8.22□□□□□ -1.09
NCL-208ENST00000466274 M0R2N6 131 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 PPP1R12BO60237 982 aaPredicted RBP8.22□□□□□ -1.09
NCL-208ENST00000466274 SPATA31C1P0DKV0 1188 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 SOX10P56693 466 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 SOGA3Q5TF21 947 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 C2CD5Q86YS7 1000 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 SIX5Q8N196 739 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 TAOK3Q9H2K8 898 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 ANKIB1Q9P2G1 1089 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
NCL-208ENST00000466274 HACL1Q9UJ83 578 aa8.22□□□□□ -1.09
NCL-208ENST00000466274 C4AP0C0L4 1744 aa8.21□□□□□ -1.09
NCL-208ENST00000466274 KIAA1551Q9HCM1 1747 aa8.21□□□□□ -1.09
NCL-208ENST00000466274 FAM229AH3BQW9 127 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 ALBP02768 609 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 TM4SF1P30408 202 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 EPHX2P34913 555 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 COL9A3Q14050 684 aaPredicted RBP8.21□□□□□ -1.1
NCL-208ENST00000466274 HABP4Q5JVS0 413 aaKnown RBP8.21□□□□□ -1.1
NCL-208ENST00000466274 CYP4F22Q6NT55 531 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 TNFRSF25Q93038 417 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 DDX21Q9NR30 783 aaKnown RBP eCLIP8.21□□□□□ -1.1
NCL-208ENST00000466274 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 USP42Q9H9J4 1324 aaKnown RBP8.21□□□□□ -1.1
NCL-208ENST00000466274 LTBP3Q9NS15 1303 aa8.21□□□□□ -1.1
NCL-208ENST00000466274 TOGARAM1Q9Y4F4 1720 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms