RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 PCNTO95613 3336 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 LAMB1P07942 1786 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 GOLIM4O00461 696 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 CYP7A1P22680 504 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 MAP2K2P36507 400 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 FAM83AQ86UY5 434 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 MAGEB6Q8N7X4 407 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 DOCK1Q14185 1865 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
RTFDC1-205ENST00000466260 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 SLURP2P0DP57 97 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 LBX1P52954 281 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 TEX11Q8IYF3 940 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 ANKRD13AQ8IZ07 590 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 SLC10A4Q96EP9 437 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
RTFDC1-205ENST00000466260 MYH8P13535 1937 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 HSPA8P11142 646 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 RHBDL3P58872 404 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 FKBP1CQ5VVH2 108 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 CSRNP1Q96S65 589 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 CSADQ9Y600 493 aa11.84□□□□□ -0.51
RTFDC1-205ENST00000466260 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 BAG3O95817 575 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 MAP3K12Q12852 859 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 VGLL4Q14135 290 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 COL13A1Q5TAT6 717 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 SH3BP5LQ7L8J4 393 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 ZKSCAN4Q969J2 545 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 OPTNQ96CV9 577 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 PAG1Q9NWQ8 432 aa11.83□□□□□ -0.52
RTFDC1-205ENST00000466260 ENTPD3O75355 529 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 TRPA1O75762 1119 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 INPP5BP32019 993 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 GJA5P36382 358 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 SLFNL1Q499Z3 407 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
RTFDC1-205ENST00000466260 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 DDX60LQ5H9U9 1706 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 ATP5JP18859 108 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 USP5P45974 858 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 SNCAIPQ9Y6H5 919 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 PTPRFP10586 1907 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 ZNF532Q9HCE3 1301 aa11.81□□□□□ -0.52
RTFDC1-205ENST00000466260 CHGBP05060 677 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 PDE6AP16499 860 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 SLC9C2Q5TAH2 1124 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 HAUS7Q99871 368 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 ECHDC1Q9NTX5 307 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 FLT1P17948 1338 aa11.8□□□□□ -0.52
RTFDC1-205ENST00000466260 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms