RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 CSADQ9Y600 493 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 RFX7Q2KHR2 1363 aa12.42□□□□□ -0.42
CD40-204ENST00000466205 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
CD40-204ENST00000466205 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 GOLIM4O00461 696 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 CAPN15O75808 1086 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 INPP5BP32019 993 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 IDI2Q9BXS1 227 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 ZNF341Q9BYN7 854 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 PRDM10Q9NQV6 1147 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 SUPT16HQ9Y5B9 1047 aaKnown RBP12.41□□□□□ -0.42
CD40-204ENST00000466205 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
CD40-204ENST00000466205 ENTPD3O75355 529 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
CD40-204ENST00000466205 SREBF2Q12772 1141 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 TGFBRAP1Q8WUH2 860 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 HOOK2Q96ED9 719 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 DCTPP1Q9H773 170 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
CD40-204ENST00000466205 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 CA12O43570 354 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 BAG3O95817 575 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 CHGBP05060 677 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
CD40-204ENST00000466205 TM4SF4P48230 202 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
CD40-204ENST00000466205 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
CD40-204ENST00000466205 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
CD40-204ENST00000466205 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
CD40-204ENST00000466205 MANSC4A6NHS7 340 aaPredicted RBP12.38□□□□□ -0.43
CD40-204ENST00000466205 IGF2BP3O00425 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
CD40-204ENST00000466205 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
CD40-204ENST00000466205 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
CD40-204ENST00000466205 SAGE1Q9NXZ1 904 aa12.38□□□□□ -0.43
CD40-204ENST00000466205 FLT1P17948 1338 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 CCL15-CCL14A0A0B4J2E2 113 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 ATP5JP18859 108 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 TTF1Q15361 905 aaPredicted RBP12.37□□□□□ -0.43
CD40-204ENST00000466205 CCL15Q16663 113 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
CD40-204ENST00000466205 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
CD40-204ENST00000466205 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
CD40-204ENST00000466205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.37□□□□□ -0.43
CD40-204ENST00000466205 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
CD40-204ENST00000466205 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 IRF6O14896 467 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 PDE6AP16499 860 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 USP5P45974 858 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
CD40-204ENST00000466205 PTPN18Q99952 460 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
CD40-204ENST00000466205 MAGEB6P1A0A0J9YX57 407 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
CD40-204ENST00000466205 PLCG2P16885 1265 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 PPP4CP60510 307 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 SCYL3Q8IZE3 742 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 ZNF296Q8WUU4 475 aaPredicted RBP12.35□□□□□ -0.43
CD40-204ENST00000466205 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 HAUS7Q99871 368 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 ECHDC1Q9NTX5 307 aa12.35□□□□□ -0.43
CD40-204ENST00000466205 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 GTF2A2P52657 109 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 DGKZQ13574 1117 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
CD40-204ENST00000466205 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 FAM43AQ8N2R8 423 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 PICK1Q9NRD5 415 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
CD40-204ENST00000466205 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 GPR25O00155 361 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 ADD2P35612 726 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 INHBEP58166 350 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 PPATQ06203 517 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 CRHR2Q13324 411 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 PPIL2Q13356 520 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
CD40-204ENST00000466205 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
CD40-204ENST00000466205 CRACR2BQ8N4Y2 399 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms