RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TGFBRAP1Q8WUH2 860 aa14.98□□□□□ -0.01
CHPF2-202ENST00000465601 HHIPL1Q96JK4 782 aa14.98□□□□□ -0.01
CHPF2-202ENST00000465601 CAPNS2Q96L46 248 aa14.98□□□□□ -0.01
CHPF2-202ENST00000465601 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
CHPF2-202ENST00000465601 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
CHPF2-202ENST00000465601 MAGEB6P1A0A0J9YX57 407 aa14.97□□□□□ -0.01
CHPF2-202ENST00000465601 DDTLA6NHG4 134 aaPredicted RBP14.97□□□□□ -0.01
CHPF2-202ENST00000465601 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
CHPF2-202ENST00000465601 ZSCAN25Q6NSZ9 544 aa14.97□□□□□ -0.01
CHPF2-202ENST00000465601 RGMBQ6NW40 437 aa14.97□□□□□ -0.01
CHPF2-202ENST00000465601 MIGA2Q7L4E1 593 aa14.97□□□□□ -0.01
CHPF2-202ENST00000465601 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
CHPF2-202ENST00000465601 RPAP1Q9BWH6 1393 aaPredicted RBP14.97□□□□□ -0.01
CHPF2-202ENST00000465601 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
CHPF2-202ENST00000465601 MYH1P12882 1939 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
CHPF2-202ENST00000465601 PDE4AP27815 886 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 ECE1P42892 770 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 IREB2P48200 963 aaKnown RBP14.96□□□□□ -0.01
CHPF2-202ENST00000465601 UBE3CQ15386 1083 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 MAP3K11Q16584 847 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 LDLRAD1Q5T700 205 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 RIOK1Q9BRS2 568 aaKnown RBP14.96□□□□□ -0.01
CHPF2-202ENST00000465601 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
CHPF2-202ENST00000465601 RNF113AO15541 343 aaKnown RBP14.95□□□□□ -0.02
CHPF2-202ENST00000465601 SLURP2P0DP57 97 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 USP5P45974 858 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 CLMNQ96JQ2 1002 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 CSRNP1Q96S65 589 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 FSD1Q9BTV5 496 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
CHPF2-202ENST00000465601 OSBPL3Q9H4L5 887 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 ARMT1Q9H993 441 aa14.95□□□□□ -0.02
CHPF2-202ENST00000465601 AOC2O75106 756 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 MBD4O95243 580 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 DCAF15Q66K64 600 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 LCORLQ8N3X6 602 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 CCDC102AQ96A19 550 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 EVI5LQ96CN4 794 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 SLC10A4Q96EP9 437 aa14.94□□□□□ -0.02
CHPF2-202ENST00000465601 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
CHPF2-202ENST00000465601 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
CHPF2-202ENST00000465601 FLT1P17948 1338 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 TRIM6-TRIM34B2RNG4 842 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 ZFYP08048 801 aaPredicted RBP14.93□□□□□ -0.02
CHPF2-202ENST00000465601 MAP3K9P80192 1104 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 RASAL3Q86YV0 1011 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 ANKRD13AQ8IZ07 590 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHPF2-202ENST00000465601 OSBP2Q969R2 916 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 CCDC136Q96JN2 1154 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 ZIC5Q96T25 663 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 CRNKL1Q9BZJ0 848 aaKnown RBP14.93□□□□□ -0.02
CHPF2-202ENST00000465601 PALD1Q9ULE6 856 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 OTOFQ9HC10 1997 aa14.93□□□□□ -0.02
CHPF2-202ENST00000465601 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
CHPF2-202ENST00000465601 FAM155AB1AL88 458 aaPredicted RBP14.92□□□□□ -0.02
CHPF2-202ENST00000465601 PRKAB2O43741 272 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 SLC10A3P09131 477 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 LRRFIP1Q32MZ4 808 aaKnown RBP14.92□□□□□ -0.02
CHPF2-202ENST00000465601 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.92□□□□□ -0.02
CHPF2-202ENST00000465601 CENPQQ7L2Z9 268 aaPredicted RBP14.92□□□□□ -0.02
CHPF2-202ENST00000465601 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 APPBP2Q92624 585 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 AIDAQ96BJ3 306 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 WRNIP1Q96S55 665 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
CHPF2-202ENST00000465601 INPP5BP32019 993 aa14.91□□□□□ -0.02
CHPF2-202ENST00000465601 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
CHPF2-202ENST00000465601 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
CHPF2-202ENST00000465601 ZKSCAN4Q969J2 545 aaPredicted RBP14.91□□□□□ -0.02
CHPF2-202ENST00000465601 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
CHPF2-202ENST00000465601 DHX36Q9H2U1 1008 aaKnown RBP14.91□□□□□ -0.02
CHPF2-202ENST00000465601 ELP3Q9H9T3 547 aa14.91□□□□□ -0.02
CHPF2-202ENST00000465601 PI4KBQ9UBF8 816 aa14.91□□□□□ -0.02
CHPF2-202ENST00000465601 ZNF112Q9UJU3 913 aa14.91□□□□□ -0.02
CHPF2-202ENST00000465601 UNCXA6NJT0 531 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 FAM196BA6NMK8 535 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 M0R2C6 588 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 MAP2K2P36507 400 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 KIF23Q02241 960 aaPredicted RBP14.9□□□□□ -0.02
CHPF2-202ENST00000465601 MAP3K10Q02779 954 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 NOGQ13253 232 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 VGLL4Q14135 290 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
CHPF2-202ENST00000465601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHPF2-202ENST00000465601 CSADQ9Y600 493 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
CHPF2-202ENST00000465601 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
CHPF2-202ENST00000465601 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 PHF20L1A8MW92 1017 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 TBC1D12O60347 775 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 ZMYM1Q5SVZ6 1142 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 SPRYD7Q5W111 196 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms