RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 PTCH2Q9Y6C5 1203 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 ATRNL1Q5VV63 1379 aa25.73■■□□□ 1.71
CSPG5-204ENST00000465441 PDHXO00330 501 aa25.73■■□□□ 1.71
CSPG5-204ENST00000465441 LACTBP83111 547 aaPredicted RBP25.73■■□□□ 1.71
CSPG5-204ENST00000465441 PICALMQ13492 652 aa25.73■■□□□ 1.71
CSPG5-204ENST00000465441 CXCL11O14625 94 aa25.72■■□□□ 1.71
CSPG5-204ENST00000465441 ARID4AP29374 1257 aaPredicted RBP25.72■■□□□ 1.71
CSPG5-204ENST00000465441 RHBDL3P58872 404 aa25.72■■□□□ 1.71
CSPG5-204ENST00000465441 ATP8B2P98198 1209 aa25.72■■□□□ 1.71
CSPG5-204ENST00000465441 KIF22Q14807 665 aa25.72■■□□□ 1.71
CSPG5-204ENST00000465441 NSUN4Q96CB9 384 aaKnown RBP25.72■■□□□ 1.71
CSPG5-204ENST00000465441 CPA4Q9UI42 421 aa25.72■■□□□ 1.71
CSPG5-204ENST00000465441 RFX7Q2KHR2 1363 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 SLC34A2O95436 690 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 LDHCP07864 332 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 POLA2Q14181 598 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 PRPF38BQ5VTL8 546 aaKnown RBP25.71■■□□□ 1.71
CSPG5-204ENST00000465441 SCYL3Q8IZE3 742 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 ZHX2Q9Y6X8 837 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 PDE4DIPQ5VU43 2346 aa25.71■■□□□ 1.71
CSPG5-204ENST00000465441 ECM2O94769 699 aaPredicted RBP25.7■■□□□ 1.7
CSPG5-204ENST00000465441 MCAMP43121 646 aa25.7■■□□□ 1.7
CSPG5-204ENST00000465441 NBPF11Q86T75 865 aa25.7■■□□□ 1.7
CSPG5-204ENST00000465441 UQCRFS1P1P0C7P4 283 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 PTPRAP18433 802 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 EN2P19622 333 aaPredicted RBP25.69■■□□□ 1.7
CSPG5-204ENST00000465441 GSTO1P78417 241 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 GPAT2Q6NUI2 795 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 SSH3Q8TE77 659 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 ZNF333Q96JL9 665 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 PICK1Q9NRD5 415 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 RAI14Q9P0K7 980 aa25.69■■□□□ 1.7
CSPG5-204ENST00000465441 CTGFP29279 349 aa25.68■■□□□ 1.7
CSPG5-204ENST00000465441 SLC9C1Q4G0N8 1177 aa25.68■■□□□ 1.7
CSPG5-204ENST00000465441 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
CSPG5-204ENST00000465441 GPR108Q9NPR9 543 aa25.68■■□□□ 1.7
CSPG5-204ENST00000465441 AFG3L2Q9Y4W6 797 aa25.68■■□□□ 1.7
CSPG5-204ENST00000465441 ZBTB7BO15156 539 aaPredicted RBP25.67■■□□□ 1.7
CSPG5-204ENST00000465441 CTNND1O60716 968 aaKnown RBP25.67■■□□□ 1.7
CSPG5-204ENST00000465441 NPM3O75607 178 aaKnown RBP25.67■■□□□ 1.7
CSPG5-204ENST00000465441 GNRH1P01148 92 aa25.67■■□□□ 1.7
CSPG5-204ENST00000465441 DIEXFQ68CQ4 756 aaKnown RBP25.67■■□□□ 1.7
CSPG5-204ENST00000465441 TMEM106CQ9BVX2 250 aa25.67■■□□□ 1.7
CSPG5-204ENST00000465441 LRP2BPQ9P2M1 347 aa25.67■■□□□ 1.7
CSPG5-204ENST00000465441 ADGRA2Q96PE1 1338 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 TBC1D12O60347 775 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 SURF6O75683 361 aaKnown RBP25.66■■□□□ 1.7
CSPG5-204ENST00000465441 MAP4K4O95819 1239 aaPredicted RBP25.66■■□□□ 1.7
CSPG5-204ENST00000465441 TNNI3KQ59H18 835 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 DBNDD2Q9BQY9 259 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 SNRKQ9NRH2 765 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 FPGT-TNNI3KV9GXZ4 949 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 HTTP42858 3142 aa25.66■■□□□ 1.7
CSPG5-204ENST00000465441 A0A0G2JLL6 359 aaPredicted RBP25.65■■□□□ 1.7
CSPG5-204ENST00000465441 RLBP1P12271 317 aa25.65■■□□□ 1.7
CSPG5-204ENST00000465441 PSMC4P43686 418 aa25.65■■□□□ 1.7
CSPG5-204ENST00000465441 OS9Q13438 667 aaPredicted RBP25.65■■□□□ 1.7
CSPG5-204ENST00000465441 FASTKD5Q7L8L6 764 aaKnown RBP25.65■■□□□ 1.7
CSPG5-204ENST00000465441 PRRT2Q7Z6L0 340 aaPredicted RBP25.65■■□□□ 1.7
CSPG5-204ENST00000465441 FTSJ3Q8IY81 847 aaKnown RBP25.65■■□□□ 1.7
CSPG5-204ENST00000465441 CYP2C8P10632 490 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 PRMT2P55345 433 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 CCDC158Q5M9N0 1113 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 TTC39AQ5SRH9 613 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 ITPRIPQ8IWB1 547 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 SH3TC2Q8TF17 1288 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 ZSWIM8A7E2V4 1837 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 DOCK2Q92608 1830 aa25.64■■□□□ 1.7
CSPG5-204ENST00000465441 MYCP01106 439 aaPredicted RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 TRIM47Q96LD4 638 aa25.63■■□□□ 1.69
CSPG5-204ENST00000465441 PARK7Q99497 189 aaKnown RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 NOP58Q9Y2X3 529 aaKnown RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 KIAA0100Q14667 2235 aaKnown RBP25.63■■□□□ 1.69
CSPG5-204ENST00000465441 FAM196BA6NMK8 535 aa25.62■■□□□ 1.69
CSPG5-204ENST00000465441 FMNL1O95466 1100 aaPredicted RBP25.62■■□□□ 1.69
CSPG5-204ENST00000465441 BCRP11274 1271 aa25.62■■□□□ 1.69
CSPG5-204ENST00000465441 SLC4A8Q2Y0W8 1093 aa25.62■■□□□ 1.69
CSPG5-204ENST00000465441 GADL1Q6ZQY3 521 aa25.62■■□□□ 1.69
CSPG5-204ENST00000465441 CCDC84Q86UT8 332 aaPredicted RBP25.62■■□□□ 1.69
CSPG5-204ENST00000465441 SRRDQ9UH36 339 aa25.62■■□□□ 1.69
CSPG5-204ENST00000465441 CYP2E1P05181 493 aaPredicted RBP25.61■■□□□ 1.69
CSPG5-204ENST00000465441 OSBPP22059 807 aa25.61■■□□□ 1.69
CSPG5-204ENST00000465441 HOXD10P28358 340 aa25.61■■□□□ 1.69
CSPG5-204ENST00000465441 TEX11Q8IYF3 940 aa25.61■■□□□ 1.69
CSPG5-204ENST00000465441 SH3RF3Q8TEJ3 882 aaPredicted RBP25.61■■□□□ 1.69
CSPG5-204ENST00000465441 CENPFP49454 3210 aa25.61■■□□□ 1.69
CSPG5-204ENST00000465441 NAA16Q6N069 864 aaPredicted RBP25.6■■□□□ 1.69
CSPG5-204ENST00000465441 TRIM75PA6NK02 468 aa25.59■■□□□ 1.69
CSPG5-204ENST00000465441 ZNF512BQ96KM6 892 aaPredicted RBP25.59■■□□□ 1.69
CSPG5-204ENST00000465441 NOL10Q9BSC4 688 aaKnown RBP25.59■■□□□ 1.69
CSPG5-204ENST00000465441 CCDC8Q9H0W5 538 aaPredicted RBP25.59■■□□□ 1.69
CSPG5-204ENST00000465441 AATFQ9NY61 560 aaKnown RBP eCLIP25.59■■□□□ 1.69
CSPG5-204ENST00000465441 BAG3O95817 575 aa25.58■■□□□ 1.69
CSPG5-204ENST00000465441 ZAP70P43403 619 aa25.58■■□□□ 1.69
CSPG5-204ENST00000465441 PPP4CP60510 307 aa25.58■■□□□ 1.69
CSPG5-204ENST00000465441 RRP1BQ14684 758 aaKnown RBP25.58■■□□□ 1.69
CSPG5-204ENST00000465441 SLC45A1Q9Y2W3 748 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms