RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 IRF6O14896 467 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 ZBTB22O15209 634 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 PPIL2Q13356 520 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 SNAPC2Q13487 334 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 ARHGEF6Q15052 776 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 XAGE2Q96GT9 111 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 ZNF341Q9BYN7 854 aa21.24■□□□□ 0.99
CPSF4-209ENST00000465132 ZCCHC17Q9NP64 241 aaKnown RBP21.24■□□□□ 0.99
CPSF4-209ENST00000465132 BTBD19C9JJ37 291 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 WDHD1O75717 1129 aaPredicted RBP21.23■□□□□ 0.99
CPSF4-209ENST00000465132 NUCB1Q02818 461 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 MIGA2Q7L4E1 593 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 FAM151AQ8WW52 585 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 DAGLAQ9Y4D2 1042 aa21.23■□□□□ 0.99
CPSF4-209ENST00000465132 TLR2O60603 784 aa21.22■□□□□ 0.99
CPSF4-209ENST00000465132 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
CPSF4-209ENST00000465132 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
CPSF4-209ENST00000465132 CDC42EP5Q6NZY7 148 aa21.22■□□□□ 0.99
CPSF4-209ENST00000465132 EAF2Q96CJ1 260 aaPredicted RBP21.22■□□□□ 0.99
CPSF4-209ENST00000465132 PCDH10Q9P2E7 1040 aa21.22■□□□□ 0.99
CPSF4-209ENST00000465132 PRDX5P30044 214 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 PPATQ06203 517 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 TTC39AQ5SRH9 613 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 ZNF333Q96JL9 665 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 ZNF512BQ96KM6 892 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-209ENST00000465132 DENND2AQ9ULE3 1009 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 PTCH2Q9Y6C5 1203 aa21.21■□□□□ 0.99
CPSF4-209ENST00000465132 MYH13Q9UKX3 1938 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 ERC2O15083 957 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 LDHBP07195 334 aaKnown RBP21.2■□□□□ 0.98
CPSF4-209ENST00000465132 EN2P19622 333 aaPredicted RBP21.2■□□□□ 0.98
CPSF4-209ENST00000465132 INPP5BP32019 993 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 TCP10Q12799 353 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 NFIAQ12857 509 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
CPSF4-209ENST00000465132 ZNF112Q9UJU3 913 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 TTC41PQ6P2S7 1318 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 SALL1Q9NSC2 1324 aa21.2■□□□□ 0.98
CPSF4-209ENST00000465132 RBBP6Q7Z6E9 1792 aaKnown RBP21.2■□□□□ 0.98
CPSF4-209ENST00000465132 IGSF3O75054 1194 aa21.19■□□□□ 0.98
CPSF4-209ENST00000465132 SLC9C1Q4G0N8 1177 aa21.19■□□□□ 0.98
CPSF4-209ENST00000465132 ARHGAP39Q9C0H5 1083 aa21.19■□□□□ 0.98
CPSF4-209ENST00000465132 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
CPSF4-209ENST00000465132 PDS5AQ29RF7 1337 aaKnown RBP21.19■□□□□ 0.98
CPSF4-209ENST00000465132 SMARCA5O60264 1052 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-209ENST00000465132 PHKA1P46020 1223 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 LACTBP83111 547 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-209ENST00000465132 NBPF11Q86T75 865 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
CPSF4-209ENST00000465132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
CPSF4-209ENST00000465132 DBNDD2Q9BQY9 259 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 TMEM106CQ9BVX2 250 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 ECHDC1Q9NTX5 307 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 USP40Q9NVE5 1235 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 FAM198AQ9UFP1 575 aa21.18■□□□□ 0.98
CPSF4-209ENST00000465132 DBNLQ9UJU6 430 aaKnown RBP21.18■□□□□ 0.98
CPSF4-209ENST00000465132 MX1P20591 662 aa21.17■□□□□ 0.98
CPSF4-209ENST00000465132 ARID4AP29374 1257 aaPredicted RBP21.17■□□□□ 0.98
CPSF4-209ENST00000465132 KIF22Q14807 665 aa21.17■□□□□ 0.98
CPSF4-209ENST00000465132 LNPKQ9C0E8 428 aa21.17■□□□□ 0.98
CPSF4-209ENST00000465132 KCNH4Q9UQ05 1017 aa21.17■□□□□ 0.98
CPSF4-209ENST00000465132 KIAA0100Q14667 2235 aaKnown RBP21.16■□□□□ 0.98
CPSF4-209ENST00000465132 ADORA1P30542 326 aa21.16■□□□□ 0.98
CPSF4-209ENST00000465132 NOL9Q5SY16 702 aaKnown RBP21.16■□□□□ 0.98
CPSF4-209ENST00000465132 ANKRD23Q86SG2 305 aa21.16■□□□□ 0.98
CPSF4-209ENST00000465132 GNRH1P01148 92 aa21.15■□□□□ 0.98
CPSF4-209ENST00000465132 C17orf99Q6UX52 265 aa21.15■□□□□ 0.98
CPSF4-209ENST00000465132 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
CPSF4-209ENST00000465132 PDHXO00330 501 aa21.14■□□□□ 0.97
CPSF4-209ENST00000465132 GLRX3O76003 335 aaKnown RBP21.14■□□□□ 0.97
CPSF4-209ENST00000465132 ATP5JP18859 108 aa21.14■□□□□ 0.97
CPSF4-209ENST00000465132 TTF1Q15361 905 aaPredicted RBP21.14■□□□□ 0.97
CPSF4-209ENST00000465132 SPTY2D1Q68D10 685 aaPredicted RBP21.14■□□□□ 0.97
CPSF4-209ENST00000465132 PRMT2P55345 433 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 MOGSQ13724 837 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 SLC4A8Q2Y0W8 1093 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 TMED8Q6PL24 325 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-209ENST00000465132 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 IDI2Q9BXS1 227 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 STAP2Q9UGK3 403 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 CPA4Q9UI42 421 aa21.13■□□□□ 0.97
CPSF4-209ENST00000465132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-209ENST00000465132 CENPFP49454 3210 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 ATRNL1Q5VV63 1379 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 GAKO14976 1311 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 ADGRA2Q96PE1 1338 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 RGS3P49796 1198 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
CPSF4-209ENST00000465132 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
CPSF4-209ENST00000465132 ZSWIM8A7E2V4 1837 aa21.12■□□□□ 0.97
CPSF4-209ENST00000465132 PHF20L1A8MW92 1017 aa21.11■□□□□ 0.97
CPSF4-209ENST00000465132 ENTPD3O75355 529 aa21.11■□□□□ 0.97
CPSF4-209ENST00000465132 MYCP01106 439 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-209ENST00000465132 CTGFP29279 349 aa21.11■□□□□ 0.97
CPSF4-209ENST00000465132 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
CPSF4-209ENST00000465132 RFX7Q2KHR2 1363 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms