RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 UQCRFS1P1P0C7P4 283 aa17■□□□□ 0.31
RPP40-203ENST00000464646 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
RPP40-203ENST00000464646 SLC9C1Q4G0N8 1177 aa17■□□□□ 0.31
RPP40-203ENST00000464646 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
RPP40-203ENST00000464646 GADL1Q6ZQY3 521 aa17■□□□□ 0.31
RPP40-203ENST00000464646 NBPF11Q86T75 865 aa17■□□□□ 0.31
RPP40-203ENST00000464646 SNRKQ9NRH2 765 aa17■□□□□ 0.31
RPP40-203ENST00000464646 ZHX2Q9Y6X8 837 aa17■□□□□ 0.31
RPP40-203ENST00000464646 GAKO14976 1311 aa16.99■□□□□ 0.31
RPP40-203ENST00000464646 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
RPP40-203ENST00000464646 ZNF112Q9UJU3 913 aa16.99■□□□□ 0.31
RPP40-203ENST00000464646 PTCH2Q9Y6C5 1203 aa16.99■□□□□ 0.31
RPP40-203ENST00000464646 POTEFA5A3E0 1075 aa16.98■□□□□ 0.31
RPP40-203ENST00000464646 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
RPP40-203ENST00000464646 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
RPP40-203ENST00000464646 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
RPP40-203ENST00000464646 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
RPP40-203ENST00000464646 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
RPP40-203ENST00000464646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPP40-203ENST00000464646 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
RPP40-203ENST00000464646 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
RPP40-203ENST00000464646 FMNL1O95466 1100 aaPredicted RBP16.97■□□□□ 0.31
RPP40-203ENST00000464646 SLURP2P0DP57 97 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 MCAMP43121 646 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 CAP1Q01518 475 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
RPP40-203ENST00000464646 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
RPP40-203ENST00000464646 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
RPP40-203ENST00000464646 GPR75-ASB3A0A0A6YYF3 556 aa16.96■□□□□ 0.31
RPP40-203ENST00000464646 FAM196BA6NMK8 535 aa16.96■□□□□ 0.31
RPP40-203ENST00000464646 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
RPP40-203ENST00000464646 LACTBP83111 547 aaPredicted RBP16.96■□□□□ 0.31
RPP40-203ENST00000464646 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
RPP40-203ENST00000464646 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
RPP40-203ENST00000464646 NSUN4Q96CB9 384 aaKnown RBP16.96■□□□□ 0.31
RPP40-203ENST00000464646 FAM163AQ96GL9 167 aaPredicted RBP16.96■□□□□ 0.31
RPP40-203ENST00000464646 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
RPP40-203ENST00000464646 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.3
RPP40-203ENST00000464646 PDE4DIPQ5VU43 2346 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 CXCL11O14625 94 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 BAG3O95817 575 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 HOXD10P28358 340 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 PSMC4P43686 418 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
RPP40-203ENST00000464646 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
RPP40-203ENST00000464646 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 PARK7Q99497 189 aaKnown RBP16.95■□□□□ 0.3
RPP40-203ENST00000464646 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
RPP40-203ENST00000464646 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPP40-203ENST00000464646 BIN2Q9UBW5 565 aaPredicted RBP16.95■□□□□ 0.3
RPP40-203ENST00000464646 KCNH4Q9UQ05 1017 aa16.95■□□□□ 0.3
RPP40-203ENST00000464646 CYP2C8P10632 490 aa16.94■□□□□ 0.3
RPP40-203ENST00000464646 PTPRAP18433 802 aa16.94■□□□□ 0.3
RPP40-203ENST00000464646 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
RPP40-203ENST00000464646 RAET1EQ8TD07 263 aa16.94■□□□□ 0.3
RPP40-203ENST00000464646 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
RPP40-203ENST00000464646 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
RPP40-203ENST00000464646 RLBP1P12271 317 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 RHBDL3P58872 404 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 POLA2Q14181 598 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
RPP40-203ENST00000464646 SSH3Q8TE77 659 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
RPP40-203ENST00000464646 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
RPP40-203ENST00000464646 ARMC5Q96C12 935 aa16.93■□□□□ 0.3
RPP40-203ENST00000464646 ZAP70P43403 619 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 ZNF384Q8TF68 577 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 OSBPL5Q9H0X9 879 aaPredicted RBP16.92■□□□□ 0.3
RPP40-203ENST00000464646 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 TAOK2Q9UL54 1235 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 DOCK1Q14185 1865 aa16.92■□□□□ 0.3
RPP40-203ENST00000464646 KIAA0100Q14667 2235 aaKnown RBP16.92■□□□□ 0.3
RPP40-203ENST00000464646 APBB1O00213 710 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
RPP40-203ENST00000464646 ZBTB22O15209 634 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 GNRH1P01148 92 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 CRACR2BQ8N4Y2 399 aaPredicted RBP16.91■□□□□ 0.3
RPP40-203ENST00000464646 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 ZNF333Q96JL9 665 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 AFG3L2Q9Y4W6 797 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 MYPNQ86TC9 1320 aa16.91■□□□□ 0.3
RPP40-203ENST00000464646 A0A0G2JLL6 359 aaPredicted RBP16.9■□□□□ 0.3
RPP40-203ENST00000464646 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
RPP40-203ENST00000464646 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
RPP40-203ENST00000464646 PLCG2P16885 1265 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 OSBPP22059 807 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 PRMT2P55345 433 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 FCGRTP55899 365 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
RPP40-203ENST00000464646 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms