RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 UBASH3BQ8TF42 649 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 WDR18Q9BV38 432 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 RNF208Q9H0X6 261 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 RAD18Q9NS91 495 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 EFR3BQ9Y2G0 817 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 SNCAIPQ9Y6H5 919 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
HMGXB4-205ENST00000464480 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 AOC2O75106 756 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 SPATA31C1P0DKV0 1188 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 MCM4P33991 863 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 ZNF165P49910 485 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 PTPN11Q06124 597 aaPredicted RBP5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 HDXQ7Z353 690 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 MCF2L2Q86YR7 1114 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 CYP4F12Q9HCS2 524 aa5.72□□□□□ -1.49
HMGXB4-205ENST00000464480 MEGF11A6BM72 1044 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 WISP1O95388 367 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 GTF2F1P35269 517 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 GSK3AP49840 483 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 ID3Q02535 119 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 NUTM2GQ5VZR2 741 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 CPLX3Q8WVH0 158 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 PLPPR2Q96GM1 343 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 DCAF5Q96JK2 942 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 NACC1Q96RE7 527 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 FERD3LQ96RJ6 166 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 TMPRSS13Q9BYE2 586 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 TACC3Q9Y6A5 838 aa5.71□□□□□ -1.5
HMGXB4-205ENST00000464480 DCDC2CA8MYV0 355 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 STK10O94804 968 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 DLGAP3O95886 979 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 APBA3O96018 575 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 IMPDH2P12268 514 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 PDE4BQ07343 736 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 AKAP4Q5JQC9 854 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 FDX2Q6P4F2 183 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 LRFN4Q6PJG9 635 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 GK5Q6ZS86 529 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 BRMS1Q9HCU9 246 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 PICK1Q9NRD5 415 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 PCDHGC5Q9Y5F6 944 aa5.7□□□□□ -1.5
HMGXB4-205ENST00000464480 PRAMEF27A3QJZ7 478 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 TMPRSS2O15393 492 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 ERVK-24P63145 666 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 MLECQ14165 292 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 INPP5AQ14642 412 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 ZC3H12AQ5D1E8 599 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 ANKRD34AQ69YU3 496 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 GPAT2Q6NUI2 795 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 KIAA1211Q6ZU35 1233 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 SMG8Q8ND04 991 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 DHX38Q92620 1227 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 SUGCTQ9HAC7 445 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 USP21Q9UK80 565 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 AP4E1Q9UPM8 1137 aa5.69□□□□□ -1.5
HMGXB4-205ENST00000464480 C9orf172C9J069 976 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 GFRA2O00451 464 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 ADH5P11766 374 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 SELPP16109 830 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 CDK8P49336 464 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 EIF6P56537 245 aaKnown RBP5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 NRG1Q02297 640 aaPredicted RBP5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 GRIK4Q16099 956 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 FBXW10Q5XX13 1052 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 SHISA2Q6UWI4 295 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 CCDC81Q6ZN84 652 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 TMEM130Q8N3G9 435 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 LENG1Q96BZ8 264 aaPredicted RBP5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 ZNRF3Q9ULT6 936 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 PCDHB14Q9Y5E9 798 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 CSADQ9Y600 493 aa5.68□□□□□ -1.5
HMGXB4-205ENST00000464480 MSTNO14793 375 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 FANCGO15287 622 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 GRIN3BO60391 1043 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 ATE1O95260 518 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 PLCG1P19174 1290 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 ETF1P62495 437 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 CLCQ05315 142 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 SOX4Q06945 474 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 C12orf40Q86WS4 652 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 CKAP2LQ8IYA6 745 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 AGGF1Q8N302 714 aaeCLIP5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 C12orf50Q8NA57 414 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 FANCD2OSQ96PS1 177 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 DNAJC2Q99543 621 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms