RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ERLIN2O94905 339 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 TNNI2P48788 182 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 CCDC42Q96M95 316 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE1Q96RT6 745 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 SLF1Q9BQI6 1058 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 PCDHA5Q9Y5H7 936 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.28□□□□□ -0.76
HPS4-208ENST00000464362 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 KRT9P35527 623 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 POLA2Q14181 598 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 POSTNQ15063 836 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 FAM47AQ5JRC9 791 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 GRAMD1CQ8IYS0 662 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
HPS4-208ENST00000464362 OSBP2Q969R2 916 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
HPS4-208ENST00000464362 ABCA9Q8IUA7 1624 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 ADCY9O60503 1353 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 BAG3O95817 575 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 CYLC1P35663 651 aaPredicted RBP10.28□□□□□ -0.76
HPS4-208ENST00000464362 PHKA1P46020 1223 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 SPAG1Q07617 926 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 TMEM87BQ96K49 555 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
HPS4-208ENST00000464362 MAST3O60307 1309 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
HPS4-208ENST00000464362 IGKV5-2P06315 115 aa10.27□□□□□ -0.76
HPS4-208ENST00000464362 ATP1A3P13637 1013 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 IFFO1Q0D2I5 559 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 KIF5AQ12840 1032 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 DDB1Q16531 1140 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 DTHD1Q6ZMT9 781 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 ALS2CR12Q96Q35 445 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 PRM3Q9NNZ6 103 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 MAP3K4Q9Y6R4 1608 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 KIF1BO60333 1816 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 DEXIO95424 95 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 PDE6AP16499 860 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 AMPD3Q01432 767 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 PUM3Q15397 648 aaKnown RBP10.27□□□□□ -0.77
HPS4-208ENST00000464362 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.77
HPS4-208ENST00000464362 PGBD1Q96JS3 809 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 GREM2Q9H772 168 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 MYO6Q9UM54 1294 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 TAF6LQ9Y6J9 622 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 CUTAO60888 179 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 BCAMP50895 628 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 TCIRG1Q13488 830 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
HPS4-208ENST00000464362 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
HPS4-208ENST00000464362 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
HPS4-208ENST00000464362 RAD51AP2Q09MP3 1159 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 PDLIM2Q96JY6 352 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 SETDB2Q96T68 719 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 PPRC1Q5VV67 1664 aaKnown RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 LRRC7Q96NW7 1537 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 M0R2C6 588 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 ARHGAP6O43182 974 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 ZEB2O60315 1214 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 CYP2E1P05181 493 aaPredicted RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 CHMP4BP1P59074 171 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 TOB2Q14106 344 aaPredicted RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 PUS7LQ9H0K6 701 aaKnown RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 ASAP1Q9ULH1 1129 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 BMP15O95972 392 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 GYG1P46976 350 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 ETF1P62495 437 aaKnown RBP10.26□□□□□ -0.77
HPS4-208ENST00000464362 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 TXLNBQ8N3L3 684 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 IFT81Q8WYA0 676 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 ATP7BP35670 1465 aa10.26□□□□□ -0.77
HPS4-208ENST00000464362 KRT86O43790 486 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 CDC25AP30304 524 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 AKNAD1Q5T1N1 836 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 CEP112Q8N8E3 955 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 USP17L12C9JPN9 530 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 USP17L21D6R901 530 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 NR5A1Q13285 461 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 TTC38Q5R3I4 469 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 MRFAP1L1Q96HT8 127 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 TTC14Q96N46 770 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
HPS4-208ENST00000464362 MADDQ8WXG6 1647 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms