RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 TMEM106CQ9BVX2 250 aa25.36■■□□□ 1.65
CD58-204ENST00000464088 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
CD58-204ENST00000464088 NDUFB9Q9Y6M9 179 aa25.36■■□□□ 1.65
CD58-204ENST00000464088 SPTY2D1Q68D10 685 aaPredicted RBP25.35■■□□□ 1.65
CD58-204ENST00000464088 ZNF384Q8TF68 577 aa25.35■■□□□ 1.65
CD58-204ENST00000464088 PIH1D3Q9NQM4 214 aaKnown RBP25.35■■□□□ 1.65
CD58-204ENST00000464088 ZBTB47Q9UFB7 747 aaPredicted RBP25.35■■□□□ 1.65
CD58-204ENST00000464088 MAST2Q6P0Q8 1798 aa25.35■■□□□ 1.65
CD58-204ENST00000464088 TTC41PQ6P2S7 1318 aa25.35■■□□□ 1.65
CD58-204ENST00000464088 CLRN2A0PK11 232 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 HHIPL2Q6UWX4 724 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 ERICH6Q7L0X2 663 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 HAUS7Q99871 368 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 BOLA2Q9H3K6 86 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 ANTXR1Q9H6X2 564 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 COLQQ9Y215 455 aaPredicted RBP25.34■■□□□ 1.65
CD58-204ENST00000464088 AOX1Q06278 1338 aa25.34■■□□□ 1.65
CD58-204ENST00000464088 MX1P20591 662 aa25.33■■□□□ 1.65
CD58-204ENST00000464088 TSHZ3Q63HK5 1081 aa25.33■■□□□ 1.65
CD58-204ENST00000464088 TEKT1Q969V4 418 aa25.33■■□□□ 1.65
CD58-204ENST00000464088 GPATCH3Q96I76 525 aa25.33■■□□□ 1.65
CD58-204ENST00000464088 ZDHHC15Q96MV8 337 aa25.33■■□□□ 1.65
CD58-204ENST00000464088 MECOMQ03112 1051 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 RASA3Q14644 834 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 ARHGEF6Q15052 776 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 NBPF11Q86T75 865 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 PI4K2BQ8TCG2 481 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 NSUN4Q96CB9 384 aaKnown RBP25.32■■□□□ 1.64
CD58-204ENST00000464088 STAP2Q9UGK3 403 aa25.32■■□□□ 1.64
CD58-204ENST00000464088 IGSF3O75054 1194 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 DZIP1Q86YF9 867 aaKnown RBP25.31■■□□□ 1.64
CD58-204ENST00000464088 OPTNQ96CV9 577 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 VEZTQ9HBM0 779 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 LRP2BPQ9P2M1 347 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 DAGLAQ9Y4D2 1042 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 GAKO14976 1311 aa25.31■■□□□ 1.64
CD58-204ENST00000464088 RBM5P52756 815 aaKnown RBP eCLIP25.3■■□□□ 1.64
CD58-204ENST00000464088 APOBEC3HQ6NTF7 200 aaKnown RBP25.3■■□□□ 1.64
CD58-204ENST00000464088 EDC3Q96F86 508 aaKnown RBP25.3■■□□□ 1.64
CD58-204ENST00000464088 FAM163AQ96GL9 167 aaPredicted RBP25.3■■□□□ 1.64
CD58-204ENST00000464088 DNAJC2Q99543 621 aaKnown RBP25.3■■□□□ 1.64
CD58-204ENST00000464088 RAI14Q9P0K7 980 aa25.3■■□□□ 1.64
CD58-204ENST00000464088 PDE1AP54750 535 aa25.29■■□□□ 1.64
CD58-204ENST00000464088 SLC9C1Q4G0N8 1177 aa25.29■■□□□ 1.64
CD58-204ENST00000464088 ELP3Q9H9T3 547 aa25.29■■□□□ 1.64
CD58-204ENST00000464088 PAG1Q9NWQ8 432 aa25.29■■□□□ 1.64
CD58-204ENST00000464088 PTCH2Q9Y6C5 1203 aa25.29■■□□□ 1.64
CD58-204ENST00000464088 GOLIM4O00461 696 aa25.28■■□□□ 1.64
CD58-204ENST00000464088 TNFAIP1Q13829 316 aa25.28■■□□□ 1.64
CD58-204ENST00000464088 TTF1Q15361 905 aaPredicted RBP25.28■■□□□ 1.64
CD58-204ENST00000464088 BRI3BPQ8WY22 251 aa25.28■■□□□ 1.64
CD58-204ENST00000464088 ERC2O15083 957 aa25.27■■□□□ 1.64
CD58-204ENST00000464088 GLRX3O76003 335 aaKnown RBP25.27■■□□□ 1.64
CD58-204ENST00000464088 CENPQQ7L2Z9 268 aaPredicted RBP25.27■■□□□ 1.64
CD58-204ENST00000464088 PLEKHM2Q8IWE5 1019 aa25.27■■□□□ 1.64
CD58-204ENST00000464088 TDRD3Q9H7E2 651 aaKnown RBP25.27■■□□□ 1.64
CD58-204ENST00000464088 ZFYVE28Q9HCC9 887 aa25.27■■□□□ 1.64
CD58-204ENST00000464088 MROH7-TTC4A0A0A0MT08 1334 aa25.27■■□□□ 1.64
CD58-204ENST00000464088 MYH7P12883 1935 aa25.27■■□□□ 1.64
CD58-204ENST00000464088 PDE4AP27815 886 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 TAF1CQ15572 869 aaPredicted RBP25.26■■□□□ 1.63
CD58-204ENST00000464088 SPDYE2Q495Y8 402 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.26■■□□□ 1.63
CD58-204ENST00000464088 SLF2Q8IX21 1173 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 OTUD5Q96G74 571 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 TEPSINQ96N21 525 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 ZNF70Q9UC06 446 aaPredicted RBP25.26■■□□□ 1.63
CD58-204ENST00000464088 CEP290O15078 2479 aa25.26■■□□□ 1.63
CD58-204ENST00000464088 SZT2Q5T011 3432 aa25.25■■□□□ 1.63
CD58-204ENST00000464088 IDH1O75874 414 aaKnown RBP25.25■■□□□ 1.63
CD58-204ENST00000464088 GTF2A2P52657 109 aa25.25■■□□□ 1.63
CD58-204ENST00000464088 GSTO1P78417 241 aa25.25■■□□□ 1.63
CD58-204ENST00000464088 SLC4A8Q2Y0W8 1093 aa25.25■■□□□ 1.63
CD58-204ENST00000464088 OSBPL3Q9H4L5 887 aa25.25■■□□□ 1.63
CD58-204ENST00000464088 GPR75-ASB3A0A0A6YYF3 556 aa25.24■■□□□ 1.63
CD58-204ENST00000464088 MAP3K12Q12852 859 aa25.24■■□□□ 1.63
CD58-204ENST00000464088 NAA16Q6N069 864 aaPredicted RBP25.24■■□□□ 1.63
CD58-204ENST00000464088 CCDC136Q96JN2 1154 aa25.24■■□□□ 1.63
CD58-204ENST00000464088 TRIOBPQ9H2D6 2365 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 CCL15-CCL14A0A0B4J2E2 113 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 H0YGN5 161 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 LDHCP07864 332 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 CCL15Q16663 113 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 ADGRA1Q86SQ6 560 aa25.23■■□□□ 1.63
CD58-204ENST00000464088 VGLL4Q14135 290 aa25.22■■□□□ 1.63
CD58-204ENST00000464088 CDC42EP5Q6NZY7 148 aa25.22■■□□□ 1.63
CD58-204ENST00000464088 TMED8Q6PL24 325 aaPredicted RBP25.22■■□□□ 1.63
CD58-204ENST00000464088 FAM43AQ8N2R8 423 aa25.22■■□□□ 1.63
CD58-204ENST00000464088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.63
CD58-204ENST00000464088 CNKSR2Q8WXI2 1034 aa25.22■■□□□ 1.63
CD58-204ENST00000464088 ZSWIM8A7E2V4 1837 aa25.21■■□□□ 1.63
CD58-204ENST00000464088 BTDP43251 543 aa25.21■■□□□ 1.63
CD58-204ENST00000464088 MAP3K9P80192 1104 aa25.21■■□□□ 1.63
CD58-204ENST00000464088 MAGEB6Q8N7X4 407 aa25.21■■□□□ 1.63
CD58-204ENST00000464088 ZCCHC17Q9NP64 241 aaKnown RBP25.21■■□□□ 1.63
CD58-204ENST00000464088 PPP4R2Q9NY27 417 aa25.21■■□□□ 1.63
CD58-204ENST00000464088 RFX7Q2KHR2 1363 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms