RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 RGS3P49796 1198 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 FCGRTP55899 365 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 SLC45A1Q9Y2W3 748 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
HMGN1-210ENST00000464078 CYP2C8P10632 490 aa21.51■■□□□ 1.03
HMGN1-210ENST00000464078 CCL5P13501 91 aa21.51■■□□□ 1.03
HMGN1-210ENST00000464078 PRKCZQ05513 592 aa21.51■■□□□ 1.03
HMGN1-210ENST00000464078 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
HMGN1-210ENST00000464078 SLAIN1Q8ND83 568 aa21.51■■□□□ 1.03
HMGN1-210ENST00000464078 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
HMGN1-210ENST00000464078 ECM2O94769 699 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-210ENST00000464078 PTPRAP18433 802 aa21.5■■□□□ 1.03
HMGN1-210ENST00000464078 FAM163AQ96GL9 167 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-210ENST00000464078 PICK1Q9NRD5 415 aa21.5■■□□□ 1.03
HMGN1-210ENST00000464078 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
HMGN1-210ENST00000464078 AFG3L2Q9Y4W6 797 aa21.5■■□□□ 1.03
HMGN1-210ENST00000464078 ZHX2Q9Y6X8 837 aa21.5■■□□□ 1.03
HMGN1-210ENST00000464078 UBXN2AP68543 259 aa21.49■■□□□ 1.03
HMGN1-210ENST00000464078 RASGRF1Q13972 1273 aa21.49■■□□□ 1.03
HMGN1-210ENST00000464078 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
HMGN1-210ENST00000464078 SH3BP5LQ7L8J4 393 aa21.49■■□□□ 1.03
HMGN1-210ENST00000464078 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-210ENST00000464078 SLF2Q8IX21 1173 aa21.48■■□□□ 1.03
HMGN1-210ENST00000464078 HTATIP2Q9BUP3 242 aa21.48■■□□□ 1.03
HMGN1-210ENST00000464078 RNF208Q9H0X6 261 aa21.48■■□□□ 1.03
HMGN1-210ENST00000464078 LRRFIP2Q9Y608 721 aaKnown RBP21.48■■□□□ 1.03
HMGN1-210ENST00000464078 CTNND1O60716 968 aaKnown RBP21.47■■□□□ 1.03
HMGN1-210ENST00000464078 CAPN2P17655 700 aa21.47■■□□□ 1.03
HMGN1-210ENST00000464078 ADORA1P30542 326 aa21.47■■□□□ 1.03
HMGN1-210ENST00000464078 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
HMGN1-210ENST00000464078 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
HMGN1-210ENST00000464078 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
HMGN1-210ENST00000464078 COL2A1P02458 1487 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 LOC285556D6RIA3 1793 aa21.46■■□□□ 1.03
HMGN1-210ENST00000464078 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 PXYLP1Q8TE99 480 aa21.46■■□□□ 1.03
HMGN1-210ENST00000464078 U2AF1L4Q8WU68 220 aaKnown RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 DPF3Q92784 378 aa21.46■■□□□ 1.03
HMGN1-210ENST00000464078 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 DDX4Q9NQI0 724 aaKnown RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 BIN2Q9UBW5 565 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 PA2G4Q9UQ80 394 aaKnown RBP21.46■■□□□ 1.03
HMGN1-210ENST00000464078 MROH7-TTC4A0A0A0MT08 1334 aa21.46■■□□□ 1.03
HMGN1-210ENST00000464078 DDTLA6NHG4 134 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-210ENST00000464078 IRF5Q13568 498 aa21.45■■□□□ 1.02
HMGN1-210ENST00000464078 ZSCAN29Q8IWY8 852 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-210ENST00000464078 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
HMGN1-210ENST00000464078 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
HMGN1-210ENST00000464078 ADCY3O60266 1144 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 FARP2O94887 1054 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-210ENST00000464078 BTDP43251 543 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 FLT3LGP49771 235 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 GADL1Q6ZQY3 521 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 CDCA7LQ96GN5 454 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 UNC93B1Q9H1C4 597 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
HMGN1-210ENST00000464078 AGTPBP1Q9UPW5 1226 aa21.44■■□□□ 1.02
HMGN1-210ENST00000464078 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
HMGN1-210ENST00000464078 TBC1D12O60347 775 aa21.43■■□□□ 1.02
HMGN1-210ENST00000464078 MTX1Q13505 466 aa21.43■■□□□ 1.02
HMGN1-210ENST00000464078 SMCR8Q8TEV9 937 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-210ENST00000464078 MEIS3Q99687 375 aa21.43■■□□□ 1.02
HMGN1-210ENST00000464078 ABCF2Q9UG63 623 aa21.43■■□□□ 1.02
HMGN1-210ENST00000464078 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
HMGN1-210ENST00000464078 A0A1B0GUL7 405 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 TNPO2O14787 897 aaKnown RBP21.42■■□□□ 1.02
HMGN1-210ENST00000464078 SGPL1O95470 568 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 MAP4K4O95819 1239 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-210ENST00000464078 INHAP05111 366 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 RHBDL3P58872 404 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
HMGN1-210ENST00000464078 ATAD5Q96QE3 1844 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 NR2E3Q9Y5X4 410 aa21.42■■□□□ 1.02
HMGN1-210ENST00000464078 TRIM75PA6NK02 468 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 TIMM10P62072 90 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 MECOMQ03112 1051 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 PICALMQ13492 652 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 FAM110CQ1W6H9 321 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 ZNF384Q8TF68 577 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 PAK6Q9NQU5 681 aaPredicted RBP21.41■■□□□ 1.02
HMGN1-210ENST00000464078 PNMA3Q9UL41 463 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
HMGN1-210ENST00000464078 ZBTB7BO15156 539 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-210ENST00000464078 SLURP2P0DP57 97 aa21.4■■□□□ 1.02
HMGN1-210ENST00000464078 ELNP15502 786 aa21.4■■□□□ 1.02
HMGN1-210ENST00000464078 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-210ENST00000464078 XAGE2Q96GT9 111 aa21.4■■□□□ 1.02
HMGN1-210ENST00000464078 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.01
HMGN1-210ENST00000464078 TBC1D2Q9BYX2 928 aa21.39■■□□□ 1.01
HMGN1-210ENST00000464078 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-210ENST00000464078 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
HMGN1-210ENST00000464078 A0A1W2PPC1 479 aa21.38■■□□□ 1.01
HMGN1-210ENST00000464078 GNAI3P08754 354 aa21.38■■□□□ 1.01
HMGN1-210ENST00000464078 TFCP2Q12800 502 aa21.38■■□□□ 1.01
HMGN1-210ENST00000464078 TREML2Q5T2D2 321 aa21.38■■□□□ 1.01
HMGN1-210ENST00000464078 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms