RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
SF3A1-205ENST00000463818 MYH13Q9UKX3 1938 aa23.2■■□□□ 1.3
SF3A1-205ENST00000463818 DDTLA6NHG4 134 aaPredicted RBP23.19■■□□□ 1.3
SF3A1-205ENST00000463818 RHBDL3P58872 404 aa23.19■■□□□ 1.3
SF3A1-205ENST00000463818 CAP1Q01518 475 aa23.19■■□□□ 1.3
SF3A1-205ENST00000463818 PICALMQ13492 652 aa23.19■■□□□ 1.3
SF3A1-205ENST00000463818 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.19■■□□□ 1.3
SF3A1-205ENST00000463818 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
SF3A1-205ENST00000463818 ZCCHC17Q9NP64 241 aaKnown RBP23.19■■□□□ 1.3
SF3A1-205ENST00000463818 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
SF3A1-205ENST00000463818 PHF20L1A8MW92 1017 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 MAP3K10Q02779 954 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 CCDC158Q5M9N0 1113 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 TTC39AQ5SRH9 613 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 SNRKQ9NRH2 765 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 KCNH4Q9UQ05 1017 aa23.18■■□□□ 1.3
SF3A1-205ENST00000463818 TLR2O60603 784 aa23.17■■□□□ 1.3
SF3A1-205ENST00000463818 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
SF3A1-205ENST00000463818 PANK1Q8TE04 598 aa23.17■■□□□ 1.3
SF3A1-205ENST00000463818 RFX7Q2KHR2 1363 aa23.16■■□□□ 1.3
SF3A1-205ENST00000463818 ATRNL1Q5VV63 1379 aa23.16■■□□□ 1.3
SF3A1-205ENST00000463818 ARHGEF6Q15052 776 aa23.16■■□□□ 1.3
SF3A1-205ENST00000463818 NPM3O75607 178 aaKnown RBP23.15■■□□□ 1.3
SF3A1-205ENST00000463818 MAP4K4O95819 1239 aaPredicted RBP23.15■■□□□ 1.3
SF3A1-205ENST00000463818 ANKRD23Q86SG2 305 aa23.15■■□□□ 1.3
SF3A1-205ENST00000463818 LAMB1P07942 1786 aa23.14■■□□□ 1.3
SF3A1-205ENST00000463818 CXCL11O14625 94 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 MOGSQ13724 837 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 CEP85Q6P2H3 762 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 SCYL3Q8IZE3 742 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 CCDC8Q9H0W5 538 aaPredicted RBP23.14■■□□□ 1.29
SF3A1-205ENST00000463818 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 ZHX2Q9Y6X8 837 aa23.14■■□□□ 1.29
SF3A1-205ENST00000463818 PDHXO00330 501 aa23.13■■□□□ 1.29
SF3A1-205ENST00000463818 PTPRAP18433 802 aa23.13■■□□□ 1.29
SF3A1-205ENST00000463818 ZNF512BQ96KM6 892 aaPredicted RBP23.13■■□□□ 1.29
SF3A1-205ENST00000463818 MYH2Q9UKX2 1941 aa23.13■■□□□ 1.29
SF3A1-205ENST00000463818 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
SF3A1-205ENST00000463818 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
SF3A1-205ENST00000463818 NAA16Q6N069 864 aaPredicted RBP23.12■■□□□ 1.29
SF3A1-205ENST00000463818 C17orf99Q6UX52 265 aa23.12■■□□□ 1.29
SF3A1-205ENST00000463818 EAF2Q96CJ1 260 aaPredicted RBP23.12■■□□□ 1.29
SF3A1-205ENST00000463818 DBNLQ9UJU6 430 aaKnown RBP23.12■■□□□ 1.29
SF3A1-205ENST00000463818 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
SF3A1-205ENST00000463818 TBC1D12O60347 775 aa23.11■■□□□ 1.29
SF3A1-205ENST00000463818 MS4A1P11836 297 aa23.11■■□□□ 1.29
SF3A1-205ENST00000463818 ZAP70P43403 619 aa23.11■■□□□ 1.29
SF3A1-205ENST00000463818 KIF22Q14807 665 aa23.11■■□□□ 1.29
SF3A1-205ENST00000463818 TEX11Q8IYF3 940 aa23.11■■□□□ 1.29
SF3A1-205ENST00000463818 TLR7Q9NYK1 1049 aaKnown RBP23.11■■□□□ 1.29
SF3A1-205ENST00000463818 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
SF3A1-205ENST00000463818 GPAT2Q6NUI2 795 aa23.1■■□□□ 1.29
SF3A1-205ENST00000463818 SH3RF3Q8TEJ3 882 aaPredicted RBP23.1■■□□□ 1.29
SF3A1-205ENST00000463818 NOL10Q9BSC4 688 aaKnown RBP23.1■■□□□ 1.29
SF3A1-205ENST00000463818 ARHGAP39Q9C0H5 1083 aa23.1■■□□□ 1.29
SF3A1-205ENST00000463818 OSBPL5Q9H0X9 879 aaPredicted RBP23.1■■□□□ 1.29
SF3A1-205ENST00000463818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.29
SF3A1-205ENST00000463818 CPA4Q9UI42 421 aa23.1■■□□□ 1.29
SF3A1-205ENST00000463818 AFG3L2Q9Y4W6 797 aa23.1■■□□□ 1.29
SF3A1-205ENST00000463818 BAG3O95817 575 aa23.09■■□□□ 1.29
SF3A1-205ENST00000463818 ARMC5Q96C12 935 aa23.09■■□□□ 1.29
SF3A1-205ENST00000463818 AATFQ9NY61 560 aaKnown RBP eCLIP23.09■■□□□ 1.29
SF3A1-205ENST00000463818 EXOC6BQ9Y2D4 811 aa23.09■■□□□ 1.29
SF3A1-205ENST00000463818 A0A0G2JLL6 359 aaPredicted RBP23.08■■□□□ 1.29
SF3A1-205ENST00000463818 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
SF3A1-205ENST00000463818 PPP4CP60510 307 aa23.08■■□□□ 1.29
SF3A1-205ENST00000463818 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.29
SF3A1-205ENST00000463818 PRRT2Q7Z6L0 340 aaPredicted RBP23.08■■□□□ 1.29
SF3A1-205ENST00000463818 PIH1D3Q9NQM4 214 aaKnown RBP23.08■■□□□ 1.29
SF3A1-205ENST00000463818 PTCH2Q9Y6C5 1203 aa23.08■■□□□ 1.29
SF3A1-205ENST00000463818 ECM2O94769 699 aaPredicted RBP23.07■■□□□ 1.28
SF3A1-205ENST00000463818 ERC1Q8IUD2 1116 aa23.07■■□□□ 1.28
SF3A1-205ENST00000463818 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
SF3A1-205ENST00000463818 POTEFA5A3E0 1075 aa23.06■■□□□ 1.28
SF3A1-205ENST00000463818 PLCG2P16885 1265 aa23.06■■□□□ 1.28
SF3A1-205ENST00000463818 GADL1Q6ZQY3 521 aa23.06■■□□□ 1.28
SF3A1-205ENST00000463818 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
SF3A1-205ENST00000463818 CCDC84Q86UT8 332 aaPredicted RBP23.06■■□□□ 1.28
SF3A1-205ENST00000463818 IGSF3O75054 1194 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 CYP2C8P10632 490 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 NBPF11Q86T75 865 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 AACSQ86V21 672 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 PARK7Q99497 189 aaKnown RBP23.05■■□□□ 1.28
SF3A1-205ENST00000463818 COG6Q9Y2V7 657 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 ADGRA2Q96PE1 1338 aa23.05■■□□□ 1.28
SF3A1-205ENST00000463818 TRIM75PA6NK02 468 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 GNRH1P01148 92 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 CTGFP29279 349 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 PSMC4P43686 418 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 SLC9C1Q4G0N8 1177 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 HSP90AB4PQ58FF6 505 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 MAPKAPK5Q8IW41 473 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 PI4KBQ9UBF8 816 aa23.04■■□□□ 1.28
SF3A1-205ENST00000463818 CYP7A1P22680 504 aa23.03■■□□□ 1.28
SF3A1-205ENST00000463818 CAP2P40123 477 aa23.03■■□□□ 1.28
SF3A1-205ENST00000463818 RRP1BQ14684 758 aaKnown RBP23.03■■□□□ 1.28
SF3A1-205ENST00000463818 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
SF3A1-205ENST00000463818 RHPN1Q8TCX5 695 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms