RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 EFCC1Q9HA90 598 aa23.75■■□□□ 1.39
TSC2-209ENST00000463601 COG6Q9Y2V7 657 aa23.75■■□□□ 1.39
TSC2-209ENST00000463601 MROH7-TTC4A0A0A0MT08 1334 aa23.75■■□□□ 1.39
TSC2-209ENST00000463601 ARID4AP29374 1257 aaPredicted RBP23.74■■□□□ 1.39
TSC2-209ENST00000463601 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
TSC2-209ENST00000463601 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
TSC2-209ENST00000463601 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
TSC2-209ENST00000463601 PTPN22Q9Y2R2 807 aa23.74■■□□□ 1.39
TSC2-209ENST00000463601 DDTLA6NHG4 134 aaPredicted RBP23.73■■□□□ 1.39
TSC2-209ENST00000463601 ENTPD3O75355 529 aa23.73■■□□□ 1.39
TSC2-209ENST00000463601 MCAMP43121 646 aa23.73■■□□□ 1.39
TSC2-209ENST00000463601 PICALMQ13492 652 aa23.73■■□□□ 1.39
TSC2-209ENST00000463601 MYO5AQ9Y4I1 1855 aaKnown RBP23.73■■□□□ 1.39
TSC2-209ENST00000463601 BRCA2P51587 3418 aa23.72■■□□□ 1.39
TSC2-209ENST00000463601 GPR75-ASB3A0A0A6YYF3 556 aa23.72■■□□□ 1.39
TSC2-209ENST00000463601 PHF20L1A8MW92 1017 aa23.72■■□□□ 1.39
TSC2-209ENST00000463601 RHBDL3P58872 404 aa23.72■■□□□ 1.39
TSC2-209ENST00000463601 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
TSC2-209ENST00000463601 SLF2Q8IX21 1173 aa23.72■■□□□ 1.39
TSC2-209ENST00000463601 NSUN4Q96CB9 384 aaKnown RBP23.72■■□□□ 1.39
TSC2-209ENST00000463601 MOGSQ13724 837 aa23.71■■□□□ 1.39
TSC2-209ENST00000463601 CEP85Q6P2H3 762 aa23.71■■□□□ 1.39
TSC2-209ENST00000463601 ZSCAN29Q8IWY8 852 aaPredicted RBP23.71■■□□□ 1.39
TSC2-209ENST00000463601 DBNDD2Q9BQY9 259 aa23.71■■□□□ 1.39
TSC2-209ENST00000463601 ZBTB40Q9NUA8 1239 aa23.71■■□□□ 1.39
TSC2-209ENST00000463601 KCNH4Q9UQ05 1017 aa23.71■■□□□ 1.39
TSC2-209ENST00000463601 TLR2O60603 784 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 SURF6O75683 361 aaKnown RBP23.7■■□□□ 1.38
TSC2-209ENST00000463601 TNNI3KQ59H18 835 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 ARHGAP39Q9C0H5 1083 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 FPGT-TNNI3KV9GXZ4 949 aa23.7■■□□□ 1.38
TSC2-209ENST00000463601 OS9Q13438 667 aaPredicted RBP23.69■■□□□ 1.38
TSC2-209ENST00000463601 ZCCHC17Q9NP64 241 aaKnown RBP23.69■■□□□ 1.38
TSC2-209ENST00000463601 KIAA0100Q14667 2235 aaKnown RBP23.69■■□□□ 1.38
TSC2-209ENST00000463601 ECM2O94769 699 aaPredicted RBP23.68■■□□□ 1.38
TSC2-209ENST00000463601 UQCRFS1P1P0C7P4 283 aa23.68■■□□□ 1.38
TSC2-209ENST00000463601 MAP3K10Q02779 954 aa23.68■■□□□ 1.38
TSC2-209ENST00000463601 GPR108Q9NPR9 543 aa23.68■■□□□ 1.38
TSC2-209ENST00000463601 MKI67P46013 3256 aaKnown RBP23.68■■□□□ 1.38
TSC2-209ENST00000463601 DOCK1Q14185 1865 aa23.68■■□□□ 1.38
TSC2-209ENST00000463601 PHIPQ8WWQ0 1821 aa23.68■■□□□ 1.38
TSC2-209ENST00000463601 ANKRD23Q86SG2 305 aa23.67■■□□□ 1.38
TSC2-209ENST00000463601 SCYL3Q8IZE3 742 aa23.67■■□□□ 1.38
TSC2-209ENST00000463601 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
TSC2-209ENST00000463601 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.67■■□□□ 1.38
TSC2-209ENST00000463601 PTPRFP10586 1907 aa23.67■■□□□ 1.38
TSC2-209ENST00000463601 POTEFA5A3E0 1075 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 PDHXO00330 501 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 GSTO1P78417 241 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 TTC39AQ5SRH9 613 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 TLR7Q9NYK1 1049 aaKnown RBP23.66■■□□□ 1.38
TSC2-209ENST00000463601 LRP2BPQ9P2M1 347 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 CPA4Q9UI42 421 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 NOP58Q9Y2X3 529 aaKnown RBP23.66■■□□□ 1.38
TSC2-209ENST00000463601 PTCH2Q9Y6C5 1203 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 ZHX2Q9Y6X8 837 aa23.66■■□□□ 1.38
TSC2-209ENST00000463601 CDK5RAP2Q96SN8 1893 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 FAM196BA6NMK8 535 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 LDHCP07864 332 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 PTPRAP18433 802 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 LACTBP83111 547 aaPredicted RBP23.65■■□□□ 1.38
TSC2-209ENST00000463601 GPAT2Q6NUI2 795 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 C17orf99Q6UX52 265 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 ARMC5Q96C12 935 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 MAST2Q6P0Q8 1798 aa23.65■■□□□ 1.38
TSC2-209ENST00000463601 ADGRA2Q96PE1 1338 aa23.64■■□□□ 1.38
TSC2-209ENST00000463601 CTGFP29279 349 aa23.64■■□□□ 1.37
TSC2-209ENST00000463601 RRP1P56182 461 aaKnown RBP23.64■■□□□ 1.37
TSC2-209ENST00000463601 CCDC84Q86UT8 332 aaPredicted RBP23.64■■□□□ 1.37
TSC2-209ENST00000463601 CCDC8Q9H0W5 538 aaPredicted RBP23.64■■□□□ 1.37
TSC2-209ENST00000463601 DBNLQ9UJU6 430 aaKnown RBP23.64■■□□□ 1.37
TSC2-209ENST00000463601 RBBP6Q7Z6E9 1792 aaKnown RBP23.64■■□□□ 1.37
TSC2-209ENST00000463601 CXCL11O14625 94 aa23.63■■□□□ 1.37
TSC2-209ENST00000463601 NPM3O75607 178 aaKnown RBP23.63■■□□□ 1.37
TSC2-209ENST00000463601 CYP2E1P05181 493 aaPredicted RBP23.63■■□□□ 1.37
TSC2-209ENST00000463601 CCDC158Q5M9N0 1113 aa23.63■■□□□ 1.37
TSC2-209ENST00000463601 SH3RF3Q8TEJ3 882 aaPredicted RBP23.63■■□□□ 1.37
TSC2-209ENST00000463601 PICK1Q9NRD5 415 aa23.63■■□□□ 1.37
TSC2-209ENST00000463601 ATAD5Q96QE3 1844 aa23.62■■□□□ 1.37
TSC2-209ENST00000463601 ADGRA1Q86SQ6 560 aa23.62■■□□□ 1.37
TSC2-209ENST00000463601 RPAP2Q8IXW5 612 aaPredicted RBP23.62■■□□□ 1.37
TSC2-209ENST00000463601 TEX11Q8IYF3 940 aa23.62■■□□□ 1.37
TSC2-209ENST00000463601 EAF2Q96CJ1 260 aaPredicted RBP23.62■■□□□ 1.37
TSC2-209ENST00000463601 OSBPL5Q9H0X9 879 aaPredicted RBP23.62■■□□□ 1.37
TSC2-209ENST00000463601 AFG3L2Q9Y4W6 797 aa23.62■■□□□ 1.37
TSC2-209ENST00000463601 SIPA1L1O43166 1804 aa23.61■■□□□ 1.37
TSC2-209ENST00000463601 A0A0G2JLL6 359 aaPredicted RBP23.61■■□□□ 1.37
TSC2-209ENST00000463601 CTNND1O60716 968 aaKnown RBP23.61■■□□□ 1.37
TSC2-209ENST00000463601 CYP2C8P10632 490 aa23.61■■□□□ 1.37
TSC2-209ENST00000463601 ZAP70P43403 619 aa23.61■■□□□ 1.37
TSC2-209ENST00000463601 ARHGEF6Q15052 776 aa23.61■■□□□ 1.37
TSC2-209ENST00000463601 NAA16Q6N069 864 aaPredicted RBP23.61■■□□□ 1.37
TSC2-209ENST00000463601 PRRT2Q7Z6L0 340 aaPredicted RBP23.61■■□□□ 1.37
TSC2-209ENST00000463601 SIRT2Q8IXJ6 389 aa23.61■■□□□ 1.37
TSC2-209ENST00000463601 PIH1D3Q9NQM4 214 aaKnown RBP23.61■■□□□ 1.37
TSC2-209ENST00000463601 AATFQ9NY61 560 aaKnown RBP eCLIP23.61■■□□□ 1.37
TSC2-209ENST00000463601 TBC1D12O60347 775 aa23.6■■□□□ 1.37
TSC2-209ENST00000463601 RRP1BQ14684 758 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms